Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RNU6-888P-201ENST00000363010 101 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.145-201ENST00000363527 102 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 SNORA63C-201ENST00000364578 129 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 MIR605-201ENST00000385078 83 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 MT-TT-201ENST00000387460 66 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 RNU2-70P-201ENST00000410718 179 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 RNU2-55P-201ENST00000411146 174 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-938P-201ENST00000411285 103 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 SNORA18.4-201ENST00000516440 124 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AP003484.1-201ENST00000530974 250 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AP000753.3-201ENST00000604083 169 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AL353765.1-201ENST00000605514 183 ntBASIC0.63□□□□□ -2.31
C9orf40Q8IXQ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.176-201ENST00000363815 109 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 snoU2_19.4-201ENST00000364329 80 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-484P-201ENST00000384016 107 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 RNY3P5-201ENST00000384127 102 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 SNORA27-201ENST00000384323 126 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.622-201ENST00000411091 108 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 AL117187.1-201ENST00000555482 181 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 MIR4282-201ENST00000583613 67 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.62□□□□□ -2.31
C9orf40Q8IXQ3 MIR377-201ENST00000362145 69 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 MIR1-1-201ENST00000362147 71 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.66-201ENST00000362862 102 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.91-201ENST00000363042 107 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 SNORD45.3-201ENST00000363836 72 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.634-201ENST00000364811 113 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.432-201ENST00000384087 111 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-472P-201ENST00000384299 107 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 MIR616-201ENST00000385293 97 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-205P-201ENST00000390858 107 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 AL606845.1-201ENST00000404881 255 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 MIR1827-201ENST00000408549 66 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 SNORD99-201ENST00000408612 74 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 MTND5P15-201ENST00000434246 349 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 SNORD36C-201ENST00000516733 66 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-453P-201ENST00000516819 85 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 MIR4264-201ENST00000583520 66 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 SNORA4-201ENST00000584302 138 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 AL365265.1-201ENST00000621045 234 ntBASIC0.61□□□□□ -2.31
C9orf40Q8IXQ3 AC023934.1-201ENST00000574529 2389 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.122-201ENST00000363331 96 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.304-201ENST00000365011 112 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-580P-201ENST00000365159 107 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.396-201ENST00000383949 103 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.518-201ENST00000384552 113 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-1011P-201ENST00000384668 107 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 AC090844.1-201ENST00000422019 156 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 AF228730.3-201ENST00000436691 102 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 SNRPGP8-201ENST00000454064 226 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RNU7-73P-201ENST00000458743 63 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RPS29P24-201ENST00000486345 171 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RNA5SP153-201ENST00000516498 76 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RNU7-53P-201ENST00000516705 60 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 AL590095.2-201ENST00000604136 117 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 AC104465.1-201ENST00000611365 139 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 RMST_2.1-201ENST00000617263 136 ntBASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
C9orf40Q8IXQ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.47-201ENST00000362697 108 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.199-201ENST00000364014 102 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.352-201ENST00000365439 102 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.416-201ENST00000384014 113 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.459-201ENST00000384251 102 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-738P-201ENST00000384531 106 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 MIR518E-201ENST00000385252 88 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-913P-201ENST00000390913 95 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 RNU6-1228P-201ENST00000391014 107 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 RPS26P5-201ENST00000418544 335 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 RNA5SP220-201ENST00000516298 104 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
C9orf40Q8IXQ3 Y_RNA.54-201ENST00000362766 105 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.149-201ENST00000363558 117 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.410-201ENST00000383992 113 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 SNORD38B-201ENST00000384690 67 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 SNORD105-201ENST00000386910 85 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 AC244023.1-201ENST00000426884 112 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 snoU13.21-201ENST00000459368 105 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 Y_RNA.673-201ENST00000516306 88 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 AC097639.2-201ENST00000603159 172 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 AC242498.1-201ENST00000604134 111 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 MIR8055-201ENST00000610739 97 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 SNORD38B-202ENST00000625943 69 ntBASIC0.58□□□□□ -2.32
C9orf40Q8IXQ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms