Protein–RNA interactions for Protein: Q70EL1

USP54, Inactive ubiquitin carboxyl-terminal hydrolase 54, humanhuman

Predictions only

Length 1,684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP54Q70EL1 MIR6717-201ENST00000622747 73 ntBASIC-1.11□□□□□ -2.59
USP54Q70EL1 MIR342-201ENST00000362212 99 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 RNU6-522P-201ENST00000364497 107 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 RNU6-47P-201ENST00000383866 107 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 AC024067.1-201ENST00000426199 223 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.12□□□□□ -2.59
USP54Q70EL1 RNU6-155P-201ENST00000516347 100 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 AC060780.3-201ENST00000589464 80 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 AC022441.3-201ENST00000605737 136 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.12□□□□□ -2.59
USP54Q70EL1 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 SNORD115-47-201ENST00000391226 86 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 SNORA26.6-201ENST00000391256 115 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 MIR548I3-201ENST00000408378 149 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 SNORA36B-201ENST00000410438 131 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 MTND2P22-201ENST00000444325 1033 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 FCF1P4-201ENST00000448326 183 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 RNU6-531P-201ENST00000516694 104 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 RNU6-759P-201ENST00000516740 103 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 MIR4423-201ENST00000580922 80 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 MIR4280-201ENST00000582178 76 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 AC024933.1-201ENST00000608472 348 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 AC027449.1-201ENST00000608890 407 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 AC097520.1-201ENST00000624435 385 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 SNORD114-25-201ENST00000363742 72 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 RNU6-842P-201ENST00000384269 107 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 MIR1207-201ENST00000408249 87 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 MTATP6P26-201ENST00000445926 662 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 RNU6-998P-201ENST00000515894 101 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 RNU6-232P-201ENST00000517144 64 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 AC127455.1-201ENST00000565496 145 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.13□□□□□ -2.59
USP54Q70EL1 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.13□□□□□ -2.59
USP54Q70EL1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.13□□□□□ -2.59
USP54Q70EL1 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.14□□□□□ -2.59
USP54Q70EL1 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.14□□□□□ -2.59
USP54Q70EL1 AC108059.2-201ENST00000434626 151 ntBASIC-1.14□□□□□ -2.59
USP54Q70EL1 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.14□□□□□ -2.59
USP54Q70EL1 AC141846.1-201ENST00000568348 142 ntBASIC-1.14□□□□□ -2.59
USP54Q70EL1 MIR548AY-201ENST00000617669 107 ntBASIC-1.14□□□□□ -2.59
USP54Q70EL1 SNORD115-2-201ENST00000362842 82 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 RNU6-653P-201ENST00000363074 106 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 Y_RNA.212-201ENST00000364177 102 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 RNU6-20P-201ENST00000384106 107 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 AF228730.4-201ENST00000421457 183 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 RNU7-188P-201ENST00000517063 64 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 MIR5701-3-201ENST00000578890 82 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 MIR5701-1-201ENST00000585138 82 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 AC122108.2-201ENST00000611946 526 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 MIR5701-2-201ENST00000615634 82 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 AC091931.1-201ENST00000623488 728 ntBASIC-1.15□□□□□ -2.59
USP54Q70EL1 SNORA63.5-201ENST00000363548 123 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 RNU4-50P-201ENST00000364361 141 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 SNORD114-29-201ENST00000364819 70 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 MIR514A2-201ENST00000385131 88 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 MIR514A3-201ENST00000385132 88 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 RNU6-332P-201ENST00000391193 108 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 RNU1-54P-201ENST00000517181 120 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 AC040926.1-201ENST00000530195 238 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 MIR4441-201ENST00000582623 100 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 MIR4306-201ENST00000583390 91 ntBASIC-1.16□□□□□ -2.59
USP54Q70EL1 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 RNU6-648P-201ENST00000410190 107 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 RNU6-938P-201ENST00000411285 103 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 RNA5SP470-201ENST00000516463 106 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 AC055872.1-201ENST00000570978 278 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 U4.2-201ENST00000618561 85 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 AC068137.3-201ENST00000639191 341 ntBASIC-1.16□□□□□ -2.6
USP54Q70EL1 RNU6-1244P-201ENST00000363614 108 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 RNU6-553P-201ENST00000364047 96 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 RNU4-16P-201ENST00000364737 141 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 RNU7-74P-201ENST00000459104 62 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 RNU7-96P-201ENST00000459535 64 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.17□□□□□ -2.6
USP54Q70EL1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 MTATP6P24-201ENST00000576835 677 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 MIR3115-201ENST00000577915 68 ntBASIC-1.17□□□□□ -2.6
USP54Q70EL1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 RNU6-801P-201ENST00000364087 105 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 RNY1P13-201ENST00000365030 105 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 AC091951.2-201ENST00000500762 203 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 RNU6-881P-201ENST00000516813 102 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.18□□□□□ -2.6
USP54Q70EL1 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.19□□□□□ -2.6
USP54Q70EL1 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.19□□□□□ -2.6
USP54Q70EL1 RNU6-144P-201ENST00000383951 107 ntBASIC-1.19□□□□□ -2.6
USP54Q70EL1 RNU6-901P-201ENST00000384593 106 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms