Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 HMGN1P33-201ENST00000432945 451 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MTND5P20-201ENST00000448677 143 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MTND4LP30-201ENST00000454092 297 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU7-102P-201ENST00000458948 62 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 snoU13.2-201ENST00000459201 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU7-185P-201ENST00000459215 60 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-507P-201ENST00000516045 100 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RNU6-693P-201ENST00000516134 107 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MIR1273G-201ENST00000577677 100 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MIR5093-201ENST00000583199 100 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 RAC1P9-201ENST00000604990 392 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 U6.90-201ENST00000614007 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 U6.70-201ENST00000620287 104 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 MIR924-201ENST00000638017 53 ntBASIC0.2□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.293-201ENST00000364908 93 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 SNORD24-201ENST00000383884 75 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.395-201ENST00000383945 109 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.466-201ENST00000384294 113 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 RNU6-602P-201ENST00000411155 105 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 MTND4P19-201ENST00000446659 478 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 MTND3P22-201ENST00000510932 243 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 MTCO2P24-201ENST00000515611 426 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 RNU6-126P-201ENST00000516685 103 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 RNU6-897P-201ENST00000517135 105 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 SNORD92-201ENST00000585078 85 ntBASIC0.19□□□□□ -2.38
TRIM40Q6P9F5 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 MIR563-201ENST00000385080 79 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 AC082651.2-201ENST00000496833 166 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 SNORD36C-201ENST00000516733 66 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.702-201ENST00000516843 96 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 RNU2-31P-201ENST00000516954 155 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 RNU7-156P-201ENST00000517214 74 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 AL133255.1-201ENST00000606374 441 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 uc_338.16-201ENST00000621804 95 ntBASIC0.18□□□□□ -2.38
TRIM40Q6P9F5 RNU4-73P-201ENST00000363164 141 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 RNU6-290P-201ENST00000365212 101 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 SNORD61-201ENST00000384252 73 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 MT-TF-201ENST00000387314 71 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 MIR526A2-201ENST00000390198 65 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.645-201ENST00000391229 102 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 PMCHL1-202ENST00000423102 261 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 RNU6-365P-201ENST00000517113 106 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 AC100767.1-201ENST00000528178 123 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 MIR4514-201ENST00000581410 57 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 MIR4795-201ENST00000584182 89 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 AC090971.5-201ENST00000621102 293 ntBASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.17□□□□□ -2.38
TRIM40Q6P9F5 SNORA25.1-201ENST00000362326 128 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 RNU6-888P-201ENST00000363010 101 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1309P-201ENST00000363305 108 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 RNU6-823P-201ENST00000391042 103 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 SNORA53-201ENST00000391141 249 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 MIR548I3-201ENST00000408378 149 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 RNU7-96P-201ENST00000459535 64 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 Y_RNA.631-201ENST00000459607 101 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 RNU6-1270P-201ENST00000517128 108 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 MIR5688-201ENST00000580619 83 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 MIR6779-201ENST00000617283 64 ntBASIC0.16□□□□□ -2.38
TRIM40Q6P9F5 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 Y_RNA.105-201ENST00000363182 111 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 RNU6-326P-201ENST00000365480 107 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 RNU6-514P-201ENST00000384208 107 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 SNORD77.3-201ENST00000391113 65 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 MIR1252-201ENST00000408861 65 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 RNU6-121P-201ENST00000410525 99 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 AL358176.2-201ENST00000425769 204 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 RNU6-448P-201ENST00000517052 107 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 AP003733.2-201ENST00000529409 171 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 MIR548S-201ENST00000581352 82 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 AC037487.3-201ENST00000606668 112 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 SNORA25.18-201ENST00000607153 114 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 Y_RNA.802-201ENST00000614892 130 ntBASIC0.15□□□□□ -2.39
TRIM40Q6P9F5 MIR30D-201ENST00000362283 70 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNA5SP62-201ENST00000363457 110 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 SNORD118-201ENST00000363593 134 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 Y_RNA.217-201ENST00000364214 105 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNU6-450P-201ENST00000364654 107 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNA5SP117-201ENST00000365294 118 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 Y_RNA.394-201ENST00000383942 103 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNU6-662P-201ENST00000384253 104 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 SNORA8.2-201ENST00000384372 139 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 SNORD12C-201ENST00000386307 89 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNU6-1190P-201ENST00000410811 104 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNU2-11P-201ENST00000459191 187 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 Y_RNA.641-201ENST00000459414 105 ntBASIC0.14□□□□□ -2.39
TRIM40Q6P9F5 RNU6-998P-201ENST00000515894 101 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms