Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 Y_RNA.771-201ENST00000598668 102 ntBASIC0.84□□□□□ -2.27
KRT39Q6A163 Y_RNA.789-201ENST00000622480 102 ntBASIC0.84□□□□□ -2.27
KRT39Q6A163 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-34-201ENST00000362441 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-12-201ENST00000362583 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-29-201ENST00000362834 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-9-201ENST00000362912 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-21-201ENST00000362963 81 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-14-201ENST00000363090 81 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-13-201ENST00000363358 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-41-201ENST00000363608 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-11-201ENST00000363616 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-5-201ENST00000363633 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-39-201ENST00000363694 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-4-201ENST00000363810 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-16-201ENST00000363887 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-28-201ENST00000363931 81 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-6-201ENST00000363942 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-42-201ENST00000364273 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-15-201ENST00000364809 81 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-1-201ENST00000364961 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-26-201ENST00000365067 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-10-201ENST00000365073 81 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-43-201ENST00000365503 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-36-201ENST00000365629 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORA2B-201ENST00000384583 137 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 MT-TG-201ENST00000387429 68 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 Y_RNA.618-201ENST00000410949 107 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 RNU6-388P-201ENST00000517012 105 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 RNU6-389P-201ENST00000517048 105 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.83□□□□□ -2.28
KRT39Q6A163 AL353765.1-201ENST00000605514 183 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 SNORD115-40-201ENST00000606510 82 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 AC108706.1-201ENST00000611053 297 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 AC078938.1-201ENST00000620993 318 ntBASIC0.83□□□□□ -2.28
KRT39Q6A163 Y_RNA.65-201ENST00000362846 100 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 Y_RNA.168-201ENST00000363740 102 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 SNORD45.3-201ENST00000363836 72 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 RNY1-201ENST00000364228 113 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 Y_RNA.241-201ENST00000364470 117 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 RNU6-396P-201ENST00000365369 105 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 SNORD114-22-201ENST00000365423 72 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 SNORD24-201ENST00000383884 75 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 SNORD61-201ENST00000384252 73 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 RNU6-125P-201ENST00000384505 107 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 SNORD89-201ENST00000390981 114 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 Y_RNA.590-201ENST00000410140 107 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 RNU2-64P-201ENST00000411315 191 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 AC090844.1-201ENST00000422019 156 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 PSMC1P5-201ENST00000512850 177 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 AL442067.1-201ENST00000613261 223 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
KRT39Q6A163 MIR377-201ENST00000362145 69 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 Y_RNA.37-201ENST00000362606 108 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 Y_RNA.66-201ENST00000362862 102 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNU6-653P-201ENST00000363074 106 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 Y_RNA.191-201ENST00000363972 113 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 SNORA20.1-201ENST00000364790 130 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 Y_RNA.292-201ENST00000364904 97 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 Y_RNA.304-201ENST00000365011 112 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNY4P28-201ENST00000365281 93 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNU6-484P-201ENST00000384016 107 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 Y_RNA.478-201ENST00000384358 107 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 MIR100-201ENST00000385259 80 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 MT-TN-201ENST00000387400 73 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNU6-994P-201ENST00000410507 111 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.81□□□□□ -2.28
KRT39Q6A163 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.81□□□□□ -2.28
KRT39Q6A163 AC087499.4-201ENST00000448505 178 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 U7.7-201ENST00000459276 60 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNY3P16-201ENST00000516338 101 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 SNORA18.4-201ENST00000516440 124 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNU6-1270P-201ENST00000517128 108 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 AC130289.1-201ENST00000577321 73 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 AC009779.6-201ENST00000603972 165 ntBASIC0.81□□□□□ -2.28
KRT39Q6A163 RNU6-888P-201ENST00000363010 101 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 snoU2_19.4-201ENST00000364329 80 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 Y_RNA.274-201ENST00000364714 101 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 Y_RNA.489-201ENST00000384410 101 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 MIR1827-201ENST00000408549 66 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 Y_RNA.626-201ENST00000411288 95 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 snoU13.16-201ENST00000459350 104 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 RNU6-693P-201ENST00000516134 107 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 RNU4-71P-201ENST00000516258 113 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 Y_RNA.679-201ENST00000516416 91 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 RNU6-1110P-201ENST00000516462 101 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 MIR6504-201ENST00000613520 61 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 AL365265.1-201ENST00000621045 234 ntBASIC0.8□□□□□ -2.28
KRT39Q6A163 Y_RNA.91-201ENST00000363042 107 ntBASIC0.79□□□□□ -2.28
KRT39Q6A163 RNU6-580P-201ENST00000365159 107 ntBASIC0.79□□□□□ -2.28
KRT39Q6A163 Y_RNA.476-201ENST00000384347 108 ntBASIC0.79□□□□□ -2.28
KRT39Q6A163 MT-TT-201ENST00000387460 66 ntBASIC0.79□□□□□ -2.28
KRT39Q6A163 RPS29P1-201ENST00000465274 159 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 308.5 ms