Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR2681-201ENST00000581814 105 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORD115-30-201ENST00000364117 82 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORD116-9-201ENST00000384000 95 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORD116-3-201ENST00000384287 95 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORA27-201ENST00000384323 126 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORD116-8-201ENST00000384365 95 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORD116-7-201ENST00000384404 95 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORD116-5-201ENST00000384462 95 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 RNU6-692P-201ENST00000384496 107 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 AL365203.2-201ENST00000423444 196 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 RNU6-90P-201ENST00000606352 106 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 AC132825.7-201ENST00000638744 335 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 RNU6-961P-201ENST00000363893 105 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 TRAJ51-201ENST00000504127 63 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 MIR4308-201ENST00000580634 81 ntBASIC-1.3□□□□□ -2.62
VPS13DQ5THJ4 SNORA40.5-201ENST00000391061 128 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 AF228730.4-201ENST00000421457 183 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 AC108081.1-201ENST00000604358 221 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 RNU6-541P-201ENST00000384709 110 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 MTND3P25-201ENST00000509243 135 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 AC097510.1-201ENST00000510945 133 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 AC120349.2-201ENST00000625002 298 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 SNORD115-8-201ENST00000363856 82 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 SNORD115-38-201ENST00000365037 82 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 MTCO2P16-201ENST00000436962 677 ntBASIC-1.31□□□□□ -2.62
VPS13DQ5THJ4 AC073343.1-201ENST00000328239 651 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RNU6-230P-201ENST00000362457 104 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RNU6-268P-201ENST00000364174 107 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RNU6-777P-201ENST00000364265 104 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RNY1P13-201ENST00000365030 105 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AL607023.1-201ENST00000620045 248 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RNU4-75P-201ENST00000364621 146 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 MTND2P18-201ENST00000419962 1030 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RNU7-138P-201ENST00000459479 64 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.511-201ENST00000384514 103 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 SNORA20-201ENST00000384662 132 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 snoU13.6-201ENST00000458785 104 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RPL39P5-202ENST00000512505 151 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AC103591.3-201ENST00000608684 209 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 RMST_3.1-201ENST00000611651 109 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 MIR6773-201ENST00000612812 74 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AC009878.1-201ENST00000621819 340 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AC022418.1-201ENST00000624118 445 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 MIR1322-201ENST00000638013 71 ntBASIC-1.32□□□□□ -2.62
VPS13DQ5THJ4 AL589826.1-201ENST00000340697 249 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 MIR302B-201ENST00000362188 73 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 SNORD114-10-201ENST00000363409 72 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 ACA59.1-201ENST00000515966 143 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 RNU6-695P-201ENST00000391157 104 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 RNU6-1200P-201ENST00000384162 107 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 RNU6-987P-201ENST00000384759 104 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 MIR7-1-201ENST00000384871 110 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 AC120024.2-201ENST00000576526 175 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 AC007671.2-201ENST00000637344 619 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 EEF1A1P40-201ENST00000412883 573 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 RNU7-51P-201ENST00000516560 62 ntBASIC-1.33□□□□□ -2.62
VPS13DQ5THJ4 MIR342-201ENST00000362212 99 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU7-116P-201ENST00000516940 62 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 AL157770.1-201ENST00000623049 439 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-720P-201ENST00000516363 108 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 MIR4464-201ENST00000580818 92 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 AC124312.5-201ENST00000604451 268 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 MIR582-201ENST00000365731 98 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-456P-201ENST00000384493 107 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-607P-201ENST00000411283 108 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-998P-201ENST00000515894 101 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU7-79P-201ENST00000516082 62 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 RNU6-685P-201ENST00000517088 95 ntBASIC-1.34□□□□□ -2.62
VPS13DQ5THJ4 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.35□□□□□ -2.62
VPS13DQ5THJ4 AC023449.1-201ENST00000454464 154 ntBASIC-1.35□□□□□ -2.62
VPS13DQ5THJ4 RNU6-612P-201ENST00000516909 102 ntBASIC-1.35□□□□□ -2.62
VPS13DQ5THJ4 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms