Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 RNU4-62P-201ENST00000410125 130 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 MIR5197-201ENST00000583721 112 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 AP000942.3-201ENST00000603702 160 ntBASIC1.28□□□□□ -2.2
RUNDC3AQ59EK9 MIR103A2-201ENST00000362154 78 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 RNA5SP432-201ENST00000362480 116 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 SNORA75.2-201ENST00000391138 150 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 SNORA75.3-201ENST00000391231 150 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 AC108059.2-201ENST00000434626 151 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 AC107297.1-201ENST00000459991 176 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 RPS29P24-201ENST00000486345 171 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 AC107027.2-201ENST00000512197 115 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 RNU1-92P-201ENST00000517017 135 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 MIR548AO-201ENST00000579992 96 ntBASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.27□□□□□ -2.21
RUNDC3AQ59EK9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 SNORA25-201ENST00000384384 134 ntBASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 AL392103.1-201ENST00000447000 198 ntBASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 AC074198.2-201ENST00000508153 258 ntBASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 SNORD79.1-201ENST00000516069 84 ntBASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 SNORA70.22-201ENST00000517160 124 ntBASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 AC027335.2-201ENST00000624030 375 ntBASIC1.26□□□□□ -2.21
RUNDC3AQ59EK9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 RNU4-84P-201ENST00000364200 139 ntBASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-597P-201ENST00000365620 102 ntBASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-768P-201ENST00000384683 107 ntBASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 RNU7-67P-201ENST00000459003 62 ntBASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 AC005840.1-201ENST00000498412 377 ntBASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.25□□□□□ -2.21
RUNDC3AQ59EK9 Y_RNA.393-201ENST00000383936 102 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 SNORA70.7-201ENST00000384159 133 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 Y_RNA.521-201ENST00000384560 114 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-913P-201ENST00000390913 95 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNA5SP127-201ENST00000411051 133 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNU2-64P-201ENST00000411315 191 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-998P-201ENST00000515894 101 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 Y_RNA.662-201ENST00000516028 97 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNA5SP458-201ENST00000516188 119 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-182P-201ENST00000516970 105 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-958P-201ENST00000516995 106 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.24□□□□□ -2.21
RUNDC3AQ59EK9 SNORA25.7-201ENST00000364375 127 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 MIR222-201ENST00000384992 110 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 MIR624-201ENST00000385217 97 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 SNORA67.5-201ENST00000391036 107 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 BTF3P4-201ENST00000418852 495 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 snoU13.16-201ENST00000459350 104 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 RNU7-21P-201ENST00000459430 62 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 RNU7-96P-201ENST00000459535 64 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 RN7SKP179-201ENST00000516126 217 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 FTX_2.1-201ENST00000618816 94 ntBASIC1.23□□□□□ -2.21
RUNDC3AQ59EK9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 MIR378A-201ENST00000362177 66 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 Y_RNA.337-201ENST00000365312 102 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 Y_RNA.357-201ENST00000365487 109 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 Y_RNA.441-201ENST00000384123 112 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 RNU6-239P-201ENST00000390990 99 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 AL035398.1-201ENST00000430869 322 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 RNU7-73P-201ENST00000458743 63 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
RUNDC3AQ59EK9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 RNU6-1082P-201ENST00000364574 107 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 PCNPP3-201ENST00000393579 471 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 AL591704.2-201ENST00000421658 181 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 AC090844.1-201ENST00000422019 156 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 RNU6-237P-201ENST00000515985 71 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 RNU7-121P-201ENST00000516604 62 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 RNU7-53P-201ENST00000516705 60 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 SCARNA15-202ENST00000516881 127 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 AL512598.1-201ENST00000610158 273 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 SEPT14P17-201ENST00000617978 177 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 MIR6516-201ENST00000630554 81 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 MIR3658-201ENST00000636291 56 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
RUNDC3AQ59EK9 RNU6-654P-201ENST00000364373 107 ntBASIC1.2□□□□□ -2.22
RUNDC3AQ59EK9 RNU2-11P-201ENST00000459191 187 ntBASIC1.2□□□□□ -2.22
RUNDC3AQ59EK9 RNU11-2P-201ENST00000516898 142 ntBASIC1.2□□□□□ -2.22
RUNDC3AQ59EK9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.2□□□□□ -2.22
RUNDC3AQ59EK9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 MIR342-201ENST00000362212 99 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 Y_RNA.150-201ENST00000363562 102 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 MIR548I3-201ENST00000408378 149 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 RNU6-1190P-201ENST00000410811 104 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 RNU6-1135P-201ENST00000411083 103 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 AC063976.4-201ENST00000421971 163 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 HMGN1P33-201ENST00000432945 451 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
RUNDC3AQ59EK9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms