Protein–RNA interactions for Protein: Q3SXY7

LRIT3, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3Q3SXY7 Y_RNA.666-201ENST00000516187 112 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 RNU6-126P-201ENST00000516685 103 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 AP003327.1-201ENST00000529684 127 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-40-201ENST00000606510 82 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 AC134878.1-201ENST00000619901 243 ntBASIC0.54□□□□□ -2.32
LRIT3Q3SXY7 RNU6-770P-201ENST00000363929 105 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 SNORD115-28-201ENST00000363931 81 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 RNU6-934P-201ENST00000365154 107 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 Y_RNA.394-201ENST00000383942 103 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 RNU6-474P-201ENST00000384243 107 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 AC091959.1-201ENST00000495857 238 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 RNU6-1143P-201ENST00000516125 104 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 MIR5589-201ENST00000579442 60 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
LRIT3Q3SXY7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.105-201ENST00000363182 111 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 RNU6-580P-201ENST00000365159 107 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 SNORA36.2-201ENST00000384004 127 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 SNORA50A-201ENST00000384225 134 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 RNU6-662P-201ENST00000384253 104 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 RNU6-121P-201ENST00000410525 99 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 SNORD77.4-201ENST00000516158 81 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 RNU6-977P-201ENST00000516411 103 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AC131281.1-201ENST00000522984 164 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AC018659.1-201ENST00000551083 169 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AC006006.1-201ENST00000603082 144 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 AC134503.1-201ENST00000633048 54 ntBASIC0.52□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.19-201ENST00000362462 99 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.170-201ENST00000363746 110 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 RNU4-67P-201ENST00000364569 141 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.276-201ENST00000364732 109 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 SNORA24-201ENST00000384096 131 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.455-201ENST00000384230 98 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 RNU6-125P-201ENST00000384505 107 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.541-201ENST00000384640 113 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 SNORA27.4-201ENST00000516650 95 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 RNU6-958P-201ENST00000516995 106 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 MIR5688-201ENST00000580619 83 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.802-201ENST00000614892 130 ntBASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
LRIT3Q3SXY7 snoU2_19.2-201ENST00000363024 80 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 SNORD45.3-201ENST00000363836 72 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 SNORA63C-201ENST00000364578 129 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 SNORA22B-201ENST00000383876 138 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 RNU6-945P-201ENST00000383947 107 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 MIR520F-201ENST00000384824 87 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 MIR526A2-201ENST00000390198 65 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 SNORA40.5-201ENST00000391061 128 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 ELOCP20-201ENST00000422460 345 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 RNU6-693P-201ENST00000516134 107 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 RNU7-53P-201ENST00000516705 60 ntBASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.5□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.158-201ENST00000363651 101 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.210-201ENST00000364161 110 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.214-201ENST00000364201 112 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 SNORD38B-201ENST00000384690 67 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 MIR215-201ENST00000384858 110 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 RNA5SP299-201ENST00000391203 116 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 SNORD83.1-201ENST00000411362 77 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 RNU7-62P-201ENST00000458856 62 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 MTCO2P24-201ENST00000515611 426 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 RNU6-365P-201ENST00000517113 106 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 MIR4771-2-201ENST00000577758 74 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 MIR4771-1-201ENST00000582617 74 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 AP000942.4-201ENST00000604811 241 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 SNORD38B-202ENST00000625943 69 ntBASIC0.49□□□□□ -2.33
LRIT3Q3SXY7 MTND4P29-201ENST00000503122 1372 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.217-201ENST00000364214 105 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.494-201ENST00000384432 111 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.527-201ENST00000384573 102 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 MIR520H-201ENST00000385126 88 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 MIR548P-201ENST00000408336 84 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 RPL21P38-201ENST00000418090 167 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 AL731563.1-201ENST00000442202 214 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.641-201ENST00000459414 105 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 AC100767.1-201ENST00000528178 123 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 AP003733.2-201ENST00000529409 171 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 snoU18.1-201ENST00000629629 71 ntBASIC0.48□□□□□ -2.33
LRIT3Q3SXY7 Y_RNA.37-201ENST00000362606 108 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 SNORD24-201ENST00000383884 75 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 SNORA27-201ENST00000384323 126 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 SNORA8.3-201ENST00000384679 139 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 MIR573-201ENST00000384964 99 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 SNORA26-201ENST00000391286 122 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 RNA5SP25-201ENST00000410815 110 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 Z95118.1-201ENST00000421372 247 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 MTCO2P12-201ENST00000427426 682 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 RNU7-73P-201ENST00000458743 63 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 snoU13.21-201ENST00000459368 105 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 AC007751.1-201ENST00000529260 376 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 AC113195.1-201ENST00000579952 141 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 AL008718.3-201ENST00000610217 321 ntBASIC0.47□□□□□ -2.33
LRIT3Q3SXY7 RNU6-369P-201ENST00000362515 102 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms