Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORA4-201ENST00000584302 138 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 Y_RNA.802-201ENST00000614892 130 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 MIR5087-201ENST00000635826 76 ntBASIC0.41□□□□□ -2.34
RFX4Q33E94 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
RFX4Q33E94 Y_RNA.66-201ENST00000362862 102 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 SNORD24-201ENST00000383884 75 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 MIR520F-201ENST00000384824 87 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 SNORA40.5-201ENST00000391061 128 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 RNU6-1190P-201ENST00000410811 104 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 AC114737.2-201ENST00000421583 173 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 RNU6-1338P-201ENST00000516328 91 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 SCARNA24.2-201ENST00000516968 130 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 MIR4662B-201ENST00000579498 81 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 MIR4676-201ENST00000583078 72 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 Z97988.1-201ENST00000637697 135 ntBASIC0.4□□□□□ -2.35
RFX4Q33E94 RNU6-888P-201ENST00000363010 101 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 Y_RNA.91-201ENST00000363042 107 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 Y_RNA.117-201ENST00000363294 101 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 SNORA27-201ENST00000384323 126 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 RNU6-1289P-201ENST00000384431 106 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 RNU6-1203P-201ENST00000410703 110 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 AL731563.1-201ENST00000442202 214 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 RNU6-977P-201ENST00000516411 103 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 RNU6-126P-201ENST00000516685 103 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 AC100767.1-201ENST00000528178 123 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 AC006006.1-201ENST00000603082 144 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 MIR6513-201ENST00000621188 64 ntBASIC0.39□□□□□ -2.35
RFX4Q33E94 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.39□□□□□ -2.35
RFX4Q33E94 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.38□□□□□ -2.35
RFX4Q33E94 Y_RNA.275-201ENST00000364726 110 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 RNU1-133P-201ENST00000364867 167 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 RNU6-484P-201ENST00000384016 107 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 MIR626-201ENST00000385032 94 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 RNU6-651P-201ENST00000411040 105 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 AF228730.3-201ENST00000436691 102 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 RPS29P24-201ENST00000486345 171 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 RNU6-229P-201ENST00000516614 102 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 AC010332.2-201ENST00000613083 1904 ntBASIC0.38□□□□□ -2.35
RFX4Q33E94 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 Y_RNA.152-201ENST00000363578 100 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 SNORA63C-201ENST00000364578 129 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 SNORA8.3-201ENST00000384679 139 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 MT-TT-201ENST00000387460 66 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 RNU6-602P-201ENST00000411155 105 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 AC098934.3-201ENST00000430450 190 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 MTCYBP6-201ENST00000441810 138 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 AL138752.1-201ENST00000452964 351 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 RNU7-56P-201ENST00000458744 62 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 RNU6-1143P-201ENST00000516125 104 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 RNU6-570P-201ENST00000517051 105 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 RNU6-365P-201ENST00000517113 106 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.37□□□□□ -2.35
RFX4Q33E94 MIR3612-201ENST00000579753 87 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 MIR5688-201ENST00000580619 83 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 AP001282.2-201ENST00000616149 309 ntBASIC0.37□□□□□ -2.35
RFX4Q33E94 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.36□□□□□ -2.35
RFX4Q33E94 snoU2_19.4-201ENST00000364329 80 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 RNU4-45P-201ENST00000365469 141 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 SNORA50A-201ENST00000384225 134 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 SNORD38B-201ENST00000384690 67 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 MIR588-201ENST00000384900 83 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.36□□□□□ -2.35
RFX4Q33E94 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.36□□□□□ -2.35
RFX4Q33E94 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.36□□□□□ -2.35
RFX4Q33E94 SNORA68.3-201ENST00000515906 83 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 AC008608.1-201ENST00000603910 127 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 SNORD38B-202ENST00000625943 69 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.36□□□□□ -2.35
RFX4Q33E94 MIR376A2-201ENST00000636782 80 ntBASIC0.36□□□□□ -2.35
RFX4Q33E94 RNU6-1309P-201ENST00000363305 108 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 Y_RNA.269-201ENST00000364685 89 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 RNU6-740P-201ENST00000364734 105 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 Y_RNA.634-201ENST00000364811 113 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 RNU6-1165P-201ENST00000410119 107 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 RNU6-985P-201ENST00000410182 104 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 SNRPGP8-201ENST00000454064 226 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.35□□□□□ -2.35
RFX4Q33E94 snoU13.2-201ENST00000459201 104 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 RNU7-53P-201ENST00000516705 60 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 RNU6-453P-201ENST00000516819 85 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.35□□□□□ -2.35
RFX4Q33E94 AC022709.1-201ENST00000615967 87 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
RFX4Q33E94 Y_RNA.237-201ENST00000364439 102 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 SNORA33.2-201ENST00000365413 134 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
RFX4Q33E94 Y_RNA.440-201ENST00000384120 114 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 Y_RNA.512-201ENST00000384518 102 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 MIR563-201ENST00000385080 79 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 SNORD12C-201ENST00000386307 89 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 MIR548I3-201ENST00000408378 149 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 Y_RNA.622-201ENST00000411091 108 ntBASIC0.34□□□□□ -2.36
RFX4Q33E94 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.34□□□□□ -2.36
RFX4Q33E94 SNORD2.1-201ENST00000458762 69 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms