Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
ATP2B3Q16720 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.12
ATP2B3Q16720 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
ATP2B3Q16720 MIR342-201ENST00000362212 99 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 SNORD50.2-201ENST00000365465 70 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 RNU6-1292P-201ENST00000383856 107 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 RNU6-1189P-201ENST00000383958 107 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 SNX2P2-201ENST00000424553 323 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 SNORD123-201ENST00000459473 70 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 RNU6-922P-201ENST00000516753 99 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
ATP2B3Q16720 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.83□□□□□ -2.12
ATP2B3Q16720 MIR548AR-201ENST00000582191 57 ntBASIC1.83□□□□□ -2.12
ATP2B3Q16720 SNORA2.2-201ENST00000365473 135 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 Y_RNA.440-201ENST00000384120 114 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 SNORA40-201ENST00000388090 126 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 MIR1304-201ENST00000408243 91 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 AL354695.1-201ENST00000427935 228 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 RNU6-1211P-201ENST00000459179 105 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 RNU6-830P-201ENST00000516353 107 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 AC019176.1-201ENST00000518519 225 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 AC090821.2-201ENST00000523552 176 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 AP001328.1-201ENST00000528550 176 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 AC015688.6-201ENST00000577737 104 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.82□□□□□ -2.12
ATP2B3Q16720 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.81□□□□□ -2.12
ATP2B3Q16720 Y_RNA.525-201ENST00000384570 113 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 snoU13.9-201ENST00000458927 103 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 RPS26P48-201ENST00000491713 339 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.81□□□□□ -2.12
ATP2B3Q16720 AC108729.3-201ENST00000513484 108 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 RNA5SP236-201ENST00000516169 116 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 Y_RNA.690-201ENST00000516603 95 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 RNU6-1234P-201ENST00000516877 103 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 AC011603.4-201ENST00000611325 277 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 AC132825.6-201ENST00000638861 357 ntBASIC1.81□□□□□ -2.12
ATP2B3Q16720 Y_RNA.410-201ENST00000383992 113 ntBASIC1.8□□□□□ -2.12
ATP2B3Q16720 Y_RNA.651-201ENST00000459380 103 ntBASIC1.8□□□□□ -2.12
ATP2B3Q16720 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
ATP2B3Q16720 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.79□□□□□ -2.12
ATP2B3Q16720 SNORD33-201ENST00000362761 85 ntBASIC1.79□□□□□ -2.12
ATP2B3Q16720 Y_RNA.218-201ENST00000364218 104 ntBASIC1.79□□□□□ -2.12
ATP2B3Q16720 SNORD41-201ENST00000386967 70 ntBASIC1.79□□□□□ -2.12
ATP2B3Q16720 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
ATP2B3Q16720 SNORA31.4-201ENST00000516049 129 ntBASIC1.79□□□□□ -2.12
ATP2B3Q16720 HSPE1P19-201ENST00000603327 295 ntBASIC1.79□□□□□ -2.12
ATP2B3Q16720 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.79□□□□□ -2.12
ATP2B3Q16720 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
ATP2B3Q16720 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.79□□□□□ -2.12
ATP2B3Q16720 RNU6-235P-201ENST00000362644 107 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 Y_RNA.120-201ENST00000363304 110 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 SNORA27-201ENST00000384323 126 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 AL606753.1-201ENST00000427435 87 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 AC087499.4-201ENST00000448505 178 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 MIR4422-201ENST00000581938 83 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 AP001340.1-201ENST00000624405 217 ntBASIC1.78□□□□□ -2.12
ATP2B3Q16720 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.13
ATP2B3Q16720 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.13
ATP2B3Q16720 Y_RNA.351-201ENST00000365436 96 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 Y_RNA.370-201ENST00000365589 108 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 RNU7-45P-201ENST00000459460 63 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 RNU6-789P-201ENST00000517105 102 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 AC090049.2-201ENST00000550377 109 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 AC108081.1-201ENST00000604358 221 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 AL022345.2-201ENST00000606307 135 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 AL596211.1-201ENST00000569873 2277 ntBASIC1.77□□□□□ -2.13
ATP2B3Q16720 MIR302D-201ENST00000362275 68 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 RNU6-81P-201ENST00000365608 104 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 MIR653-201ENST00000385279 96 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 MIR320A-201ENST00000385302 82 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 AC009474.2-201ENST00000451383 136 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 RNU1-92P-201ENST00000517017 135 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 SNORA74.3-201ENST00000517108 154 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 AC091932.4-201ENST00000623386 200 ntBASIC1.76□□□□□ -2.13
ATP2B3Q16720 SNORD115-34-201ENST00000362441 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-12-201ENST00000362583 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-29-201ENST00000362834 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-9-201ENST00000362912 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-21-201ENST00000362963 81 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-14-201ENST00000363090 81 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-13-201ENST00000363358 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-41-201ENST00000363608 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-11-201ENST00000363616 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-5-201ENST00000363633 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-39-201ENST00000363694 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-4-201ENST00000363810 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-16-201ENST00000363887 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-6-201ENST00000363942 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-42-201ENST00000364273 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 RNU4-16P-201ENST00000364737 141 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-15-201ENST00000364809 81 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-1-201ENST00000364961 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD1A-201ENST00000364968 72 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-26-201ENST00000365067 82 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-10-201ENST00000365073 81 ntBASIC1.75□□□□□ -2.13
ATP2B3Q16720 SNORD115-43-201ENST00000365503 82 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms