Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNA5SP133-201ENST00000363368 119 ntBASIC-1.71□□□□□ -2.68
HIST1H1AQ02539 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.71□□□□□ -2.68
HIST1H1AQ02539 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.71□□□□□ -2.68
HIST1H1AQ02539 RNU7-74P-201ENST00000459104 62 ntBASIC-1.71□□□□□ -2.68
HIST1H1AQ02539 AC069503.3-201ENST00000618674 145 ntBASIC-1.71□□□□□ -2.68
HIST1H1AQ02539 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 MIR3920-201ENST00000581751 86 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 AL080274.1-201ENST00000605565 220 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 AC018645.2-201ENST00000609151 472 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 AC022140.2-201ENST00000623500 188 ntBASIC-1.72□□□□□ -2.68
HIST1H1AQ02539 RNU6-874P-201ENST00000362390 105 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 SNORD64-201ENST00000386683 67 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 AC022137.1-201ENST00000483735 151 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 MIR5701-3-201ENST00000578890 82 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 YWHAEP2-201ENST00000580066 112 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 MIR548H5-201ENST00000580314 60 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 MIR5701-1-201ENST00000585138 82 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 MIR5701-2-201ENST00000615634 82 ntBASIC-1.73□□□□□ -2.69
HIST1H1AQ02539 MIR342-201ENST00000362212 99 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.48-201ENST00000362710 103 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 RNU6-522P-201ENST00000364497 107 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 RNU6-154P-201ENST00000384306 106 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 MIR513B-201ENST00000385136 84 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 AL593851.1-201ENST00000426171 157 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 MTND3P16-201ENST00000452205 344 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 RNU7-55P-201ENST00000459426 62 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 SNORD22.1-201ENST00000516331 125 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 RNA5SP33-201ENST00000516687 98 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 RNU7-149P-201ENST00000516739 59 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 RNU2-31P-201ENST00000516954 155 ntBASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.74□□□□□ -2.69
HIST1H1AQ02539 MIR302B-201ENST00000362188 73 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 RNU6-431P-201ENST00000383874 107 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 MIR514A2-201ENST00000385131 88 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 MIR514A3-201ENST00000385132 88 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 AL590004.1-201ENST00000405321 300 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 AF228730.4-201ENST00000421457 183 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 snoU13.13-201ENST00000458842 104 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 RNU6-470P-201ENST00000515954 104 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 MIR548AE1-201ENST00000583292 70 ntBASIC-1.75□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.201-201ENST00000364052 96 ntBASIC-1.76□□□□□ -2.69
HIST1H1AQ02539 RNU6-449P-201ENST00000383914 107 ntBASIC-1.76□□□□□ -2.69
HIST1H1AQ02539 RNU6-306P-201ENST00000384617 107 ntBASIC-1.76□□□□□ -2.69
HIST1H1AQ02539 SNORA36B-201ENST00000410438 131 ntBASIC-1.76□□□□□ -2.69
HIST1H1AQ02539 AL353193.1-201ENST00000421444 268 ntBASIC-1.76□□□□□ -2.69
HIST1H1AQ02539 U6.109-201ENST00000636749 87 ntBASIC-1.76□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 RNU6-1301P-201ENST00000362724 104 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 SNORD115-2-201ENST00000362842 82 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 SNORD24-201ENST00000383884 75 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 SNORA18-201ENST00000384416 132 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 MIR599-201ENST00000385069 95 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 AP000533.3-201ENST00000447704 118 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 RNU6-693P-201ENST00000516134 107 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 MIR382-201ENST00000637119 76 ntBASIC-1.77□□□□□ -2.69
HIST1H1AQ02539 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.78□□□□□ -2.69
HIST1H1AQ02539 MTND2P14-201ENST00000482139 351 ntBASIC-1.78□□□□□ -2.69
HIST1H1AQ02539 MTND2P31-201ENST00000512602 616 ntBASIC-1.78□□□□□ -2.69
HIST1H1AQ02539 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 MIR548A2-201ENST00000384956 97 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 MIR122-201ENST00000385044 85 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 MTCO2P19-201ENST00000427513 598 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 AL009048.1-201ENST00000450437 298 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 AC098826.2-201ENST00000452011 651 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 AC023449.1-201ENST00000454464 154 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 RNU7-10P-201ENST00000607194 63 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 AC097520.1-201ENST00000624435 385 ntBASIC-1.79□□□□□ -2.7
HIST1H1AQ02539 RNU6-1252P-201ENST00000363054 104 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.135-201ENST00000363439 95 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 RNU6-831P-201ENST00000384548 107 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 RNU6-261P-201ENST00000459506 102 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 RNU7-13P-201ENST00000516413 62 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 RNU6-706P-201ENST00000517229 104 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 ZNF519P2-201ENST00000557032 169 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 AC024933.1-201ENST00000608472 348 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 AC011603.4-201ENST00000611325 277 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 DISC2.1-201ENST00000612827 205 ntBASIC-1.8□□□□□ -2.7
HIST1H1AQ02539 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 MIR20A-201ENST00000362279 71 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.81□□□□□ -2.7
HIST1H1AQ02539 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.81□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms