Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
CBX1P83916 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
CBX1P83916 Y_RNA.293-201ENST00000364908 93 ntBASIC0.07□□□□□ -2.4
CBX1P83916 SNORD24-201ENST00000383884 75 ntBASIC0.07□□□□□ -2.4
CBX1P83916 MIR1302-11-201ENST00000408051 138 ntBASIC0.07□□□□□ -2.4
CBX1P83916 MIR1302-9-201ENST00000408365 138 ntBASIC0.07□□□□□ -2.4
CBX1P83916 MIR1302-10-201ENST00000408734 138 ntBASIC0.07□□□□□ -2.4
CBX1P83916 RNU2-31P-201ENST00000516954 155 ntBASIC0.07□□□□□ -2.4
CBX1P83916 AC069113.3-201ENST00000521019 150 ntBASIC0.07□□□□□ -2.4
CBX1P83916 AC133485.4-201ENST00000561835 220 ntBASIC0.07□□□□□ -2.4
CBX1P83916 AC124312.5-201ENST00000604451 268 ntBASIC0.07□□□□□ -2.4
CBX1P83916 MIR1302-2-201ENST00000607096 138 ntBASIC0.07□□□□□ -2.4
CBX1P83916 Y_RNA.424-201ENST00000384063 103 ntBASIC0.06□□□□□ -2.4
CBX1P83916 RNU6-815P-201ENST00000384080 113 ntBASIC0.06□□□□□ -2.4
CBX1P83916 Y_RNA.445-201ENST00000384168 102 ntBASIC0.06□□□□□ -2.4
CBX1P83916 MIR548A2-201ENST00000384956 97 ntBASIC0.06□□□□□ -2.4
CBX1P83916 SNORD12C-201ENST00000386307 89 ntBASIC0.06□□□□□ -2.4
CBX1P83916 MIR548I3-201ENST00000408378 149 ntBASIC0.06□□□□□ -2.4
CBX1P83916 RNU7-96P-201ENST00000459535 64 ntBASIC0.06□□□□□ -2.4
CBX1P83916 AC100767.1-201ENST00000528178 123 ntBASIC0.06□□□□□ -2.4
CBX1P83916 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.06□□□□□ -2.4
CBX1P83916 MIR30D-201ENST00000362283 70 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RNU6-1272P-201ENST00000362776 107 ntBASIC0.05□□□□□ -2.4
CBX1P83916 SNORA72.1-201ENST00000363485 129 ntBASIC0.05□□□□□ -2.4
CBX1P83916 SNORD61-201ENST00000384252 73 ntBASIC0.05□□□□□ -2.4
CBX1P83916 SNORD77.3-201ENST00000391113 65 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RNU6-1190P-201ENST00000410811 104 ntBASIC0.05□□□□□ -2.4
CBX1P83916 AL138752.1-201ENST00000452964 351 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RNU2-11P-201ENST00000459191 187 ntBASIC0.05□□□□□ -2.4
CBX1P83916 MTCO2P24-201ENST00000515611 426 ntBASIC0.05□□□□□ -2.4
CBX1P83916 Y_RNA.715-201ENST00000517082 110 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RNU6-365P-201ENST00000517113 106 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RNU6-1270P-201ENST00000517128 108 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CBX1P83916 AC112693.2-201ENST00000556538 232 ntBASIC0.05□□□□□ -2.4
CBX1P83916 AC112487.2-201ENST00000637950 304 ntBASIC0.05□□□□□ -2.4
CBX1P83916 RNU6-888P-201ENST00000363010 101 ntBASIC0.04□□□□□ -2.4
CBX1P83916 RNU6-1099P-201ENST00000363533 107 ntBASIC0.04□□□□□ -2.4
CBX1P83916 RNU4-67P-201ENST00000364569 141 ntBASIC0.04□□□□□ -2.4
CBX1P83916 Y_RNA.315-201ENST00000365117 102 ntBASIC0.04□□□□□ -2.4
CBX1P83916 SNORA63.7-201ENST00000365579 123 ntBASIC0.04□□□□□ -2.4
CBX1P83916 SNORD115-46-201ENST00000390982 71 ntBASIC0.04□□□□□ -2.4
CBX1P83916 MTND4LP30-201ENST00000454092 297 ntBASIC0.04□□□□□ -2.4
CBX1P83916 Y_RNA.639-201ENST00000458981 102 ntBASIC0.04□□□□□ -2.4
CBX1P83916 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.04□□□□□ -2.4
CBX1P83916 RNU6-397P-201ENST00000516226 104 ntBASIC0.04□□□□□ -2.4
CBX1P83916 RNU6-469P-201ENST00000516253 101 ntBASIC0.04□□□□□ -2.4
CBX1P83916 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.04□□□□□ -2.4
CBX1P83916 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.04□□□□□ -2.4
CBX1P83916 AC007485.1-201ENST00000616755 206 ntBASIC0.04□□□□□ -2.4
CBX1P83916 PVT1_3.1-201ENST00000620853 95 ntBASIC0.04□□□□□ -2.4
CBX1P83916 Y_RNA.7-201ENST00000362352 102 ntBASIC0.03□□□□□ -2.4
CBX1P83916 Y_RNA.183-201ENST00000363882 113 ntBASIC0.03□□□□□ -2.4
CBX1P83916 Y_RNA.197-201ENST00000364004 102 ntBASIC0.03□□□□□ -2.4
CBX1P83916 Y_RNA.529-201ENST00000384586 119 ntBASIC0.03□□□□□ -2.4
CBX1P83916 SNORD93-201ENST00000408813 74 ntBASIC0.03□□□□□ -2.4
CBX1P83916 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.03□□□□□ -2.4
CBX1P83916 Y_RNA.631-201ENST00000459607 101 ntBASIC0.03□□□□□ -2.4
CBX1P83916 RNU6-998P-201ENST00000515894 101 ntBASIC0.03□□□□□ -2.4
CBX1P83916 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.03□□□□□ -2.4
CBX1P83916 MIR1273G-201ENST00000577677 100 ntBASIC0.03□□□□□ -2.4
CBX1P83916 AC090574.1-201ENST00000623186 233 ntBASIC0.03□□□□□ -2.4
CBX1P83916 Y_RNA.154-201ENST00000363624 102 ntBASIC0.02□□□□□ -2.41
CBX1P83916 Y_RNA.356-201ENST00000365475 113 ntBASIC0.02□□□□□ -2.41
CBX1P83916 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
CBX1P83916 MIR526A2-201ENST00000390198 65 ntBASIC0.02□□□□□ -2.41
CBX1P83916 RNU2-59P-201ENST00000410482 191 ntBASIC0.02□□□□□ -2.41
CBX1P83916 PMCHL1-202ENST00000423102 261 ntBASIC0.02□□□□□ -2.41
CBX1P83916 RPL39P25-201ENST00000449384 154 ntBASIC0.02□□□□□ -2.41
CBX1P83916 Y_RNA.673-201ENST00000516306 88 ntBASIC0.02□□□□□ -2.41
CBX1P83916 RNU6-504P-201ENST00000516568 104 ntBASIC0.02□□□□□ -2.41
CBX1P83916 AC131281.1-201ENST00000522984 164 ntBASIC0.02□□□□□ -2.41
CBX1P83916 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.02□□□□□ -2.41
CBX1P83916 Y_RNA.112-201ENST00000363250 102 ntBASIC0.01□□□□□ -2.41
CBX1P83916 SNORA36.1-201ENST00000363424 132 ntBASIC0.01□□□□□ -2.41
CBX1P83916 Y_RNA.579-201ENST00000390939 94 ntBASIC0.01□□□□□ -2.41
CBX1P83916 Y_RNA.581-201ENST00000391017 97 ntBASIC0.01□□□□□ -2.41
CBX1P83916 RNU4-83P-201ENST00000410863 133 ntBASIC0.01□□□□□ -2.41
CBX1P83916 RNU6-875P-201ENST00000516488 106 ntBASIC0.01□□□□□ -2.41
CBX1P83916 AP003733.2-201ENST00000529409 171 ntBASIC0.01□□□□□ -2.41
CBX1P83916 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.01□□□□□ -2.41
CBX1P83916 SNORA25.1-201ENST00000362326 128 ntBASIC0□□□□□ -2.41
CBX1P83916 Y_RNA.42-201ENST00000362660 108 ntBASIC0□□□□□ -2.41
CBX1P83916 Y_RNA.58-201ENST00000362807 102 ntBASIC0□□□□□ -2.41
CBX1P83916 Y_RNA.263-201ENST00000364659 114 ntBASIC0□□□□□ -2.41
CBX1P83916 RNY3P1-201ENST00000365085 102 ntBASIC0□□□□□ -2.41
CBX1P83916 RNU6-290P-201ENST00000365212 101 ntBASIC0□□□□□ -2.41
CBX1P83916 RNU6-1283P-201ENST00000365314 105 ntBASIC0□□□□□ -2.41
CBX1P83916 RNU6-514P-201ENST00000384208 107 ntBASIC0□□□□□ -2.41
CBX1P83916 AL512326.2-201ENST00000426359 151 ntBASIC0□□□□□ -2.41
CBX1P83916 AF228730.3-201ENST00000436691 102 ntBASIC0□□□□□ -2.41
CBX1P83916 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0□□□□□ -2.41
CBX1P83916 RNU6-897P-201ENST00000517135 105 ntBASIC0□□□□□ -2.41
CBX1P83916 AP003327.1-201ENST00000529684 127 ntBASIC0□□□□□ -2.41
CBX1P83916 MIR5688-201ENST00000580619 83 ntBASIC0□□□□□ -2.41
CBX1P83916 RAC1P9-201ENST00000604990 392 ntBASIC0□□□□□ -2.41
CBX1P83916 AC037487.3-201ENST00000606668 112 ntBASIC0□□□□□ -2.41
CBX1P83916 Y_RNA.802-201ENST00000614892 130 ntBASIC0□□□□□ -2.41
CBX1P83916 MIR8066-201ENST00000617280 78 ntBASIC0□□□□□ -2.41
CBX1P83916 MIR342-201ENST00000362212 99 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms