Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 SNORD61-201ENST00000384252 73 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 AC074198.2-201ENST00000508153 258 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 AP001328.1-201ENST00000528550 176 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 AP000676.1-201ENST00000533307 52 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.42□□□□□ -2.64
LSM3P62310 AC073648.5-201ENST00000603502 305 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 MIR6128-201ENST00000615528 109 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 MIR6851-201ENST00000617060 67 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 uc_338.10-201ENST00000621872 182 ntBASIC-1.42□□□□□ -2.64
LSM3P62310 Y_RNA.296-201ENST00000364930 108 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 AF228730.3-201ENST00000436691 102 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 MIR3920-201ENST00000581751 86 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 MIR4636-201ENST00000582271 80 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.43□□□□□ -2.64
LSM3P62310 AL049861.1-201ENST00000603130 150 ntBASIC-1.43□□□□□ -2.64
LSM3P62310 Y_RNA.170-201ENST00000363746 110 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 SNORD114-29-201ENST00000364819 70 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 RNY1P2-201ENST00000364820 117 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 AL603914.1-201ENST00000401964 204 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 AL500527.2-201ENST00000454105 95 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 SNORD5.1-201ENST00000458800 75 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 MIR3145-201ENST00000580727 82 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.44□□□□□ -2.64
LSM3P62310 AC068137.3-201ENST00000639191 341 ntBASIC-1.44□□□□□ -2.64
LSM3P62310 Y_RNA.414-201ENST00000384011 101 ntBASIC-1.45□□□□□ -2.64
LSM3P62310 RNU6-831P-201ENST00000384548 107 ntBASIC-1.45□□□□□ -2.64
LSM3P62310 Y_RNA.530-201ENST00000384587 101 ntBASIC-1.45□□□□□ -2.64
LSM3P62310 MIR599-201ENST00000385069 95 ntBASIC-1.45□□□□□ -2.64
LSM3P62310 RNU1-54P-201ENST00000517181 120 ntBASIC-1.45□□□□□ -2.64
LSM3P62310 YWHAEP2-201ENST00000580066 112 ntBASIC-1.45□□□□□ -2.64
LSM3P62310 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.46□□□□□ -2.64
LSM3P62310 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.46□□□□□ -2.64
LSM3P62310 SNORD115-44-201ENST00000365391 82 ntBASIC-1.46□□□□□ -2.64
LSM3P62310 RNA5SP261-201ENST00000410536 106 ntBASIC-1.46□□□□□ -2.64
LSM3P62310 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.46□□□□□ -2.64
LSM3P62310 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.46□□□□□ -2.64
LSM3P62310 MIR6841-201ENST00000637129 72 ntBASIC-1.46□□□□□ -2.64
LSM3P62310 MTND5P18-201ENST00000445624 1801 ntBASIC-1.46□□□□□ -2.64
LSM3P62310 SNORD81.1-201ENST00000363064 77 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 RNU6-900P-201ENST00000384498 102 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 snoU13.13-201ENST00000458842 104 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 SNORA27.4-201ENST00000516650 95 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 RNA5SP480-201ENST00000516840 109 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 AC009094.1-201ENST00000564443 426 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 AL021707.8-201ENST00000609428 183 ntBASIC-1.47□□□□□ -2.64
LSM3P62310 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 RNU6-154P-201ENST00000384306 106 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 RNU6-383P-201ENST00000410864 94 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 RNU4-63P-201ENST00000411313 118 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 MTND1P2-201ENST00000430604 821 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 SNORD11.1-201ENST00000459482 85 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 RNU6-1088P-201ENST00000516850 104 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 MTND3P12-201ENST00000559068 328 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 AC092794.2-201ENST00000620933 563 ntBASIC-1.48□□□□□ -2.65
LSM3P62310 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.48□□□□□ -2.65
LSM3P62310 SNORA22.1-201ENST00000362701 134 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 MTND4P28-201ENST00000426217 387 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 TRAJ51-201ENST00000504127 63 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 RN7SKP295-201ENST00000517264 153 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 MIR3179-1-201ENST00000578940 84 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 MIR3179-2-201ENST00000579107 84 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 MIR3179-3-201ENST00000579566 84 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 MIR548H5-201ENST00000580314 60 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 AC108676.2-201ENST00000605225 163 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 MIR3179-4-201ENST00000617599 84 ntBASIC-1.49□□□□□ -2.65
LSM3P62310 Y_RNA.2-201ENST00000362330 96 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 Y_RNA.351-201ENST00000365436 96 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 SNORD24-201ENST00000383884 75 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 RNU6-449P-201ENST00000383914 107 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 SNORA72.4-201ENST00000384174 132 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 MTND2P22-201ENST00000444325 1033 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 RNU7-79P-201ENST00000516082 62 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 MIR2355-201ENST00000517199 87 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.5□□□□□ -2.65
LSM3P62310 DISC2.1-201ENST00000612827 205 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 uc_338.19-201ENST00000616808 99 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 AC069503.3-201ENST00000618674 145 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 MIR376A2-201ENST00000636782 80 ntBASIC-1.5□□□□□ -2.65
LSM3P62310 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 RNU6-888P-201ENST00000363010 101 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 RNU6-1189P-201ENST00000383958 107 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 MIR517B-201ENST00000385102 67 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 RNU6-308P-201ENST00000390957 107 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 AC074085.1-201ENST00000413598 418 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 AL160004.2-201ENST00000432935 350 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 MIR2053-201ENST00000459295 91 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.51□□□□□ -2.65
LSM3P62310 AC100767.1-201ENST00000528178 123 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.51□□□□□ -2.65
LSM3P62310 RNU4-80P-201ENST00000363200 141 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms