Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORA3.2-201ENST00000408221 125 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 IGKV3-31-201ENST00000523109 329 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 MIR4791-201ENST00000607666 84 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 U6.95-201ENST00000636931 70 ntBASIC1.79□□□□□ -2.12
CLRN1P58418 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CLRN1P58418 RNU4-16P-201ENST00000364737 141 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 RPS29P29-201ENST00000456396 171 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 SNORD33.1-201ENST00000516213 88 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 AC015688.6-201ENST00000577737 104 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 AC243994.1-201ENST00000618627 109 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.78□□□□□ -2.12
CLRN1P58418 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.78□□□□□ -2.12
CLRN1P58418 RNU6-834P-201ENST00000362367 110 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 RNA5SP138-201ENST00000365098 114 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 RNU6-1056P-201ENST00000383996 107 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 SNORA24-201ENST00000384096 131 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 SNORA70.7-201ENST00000384159 133 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 SNORD20-201ENST00000384550 80 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 RNU6-1067P-201ENST00000384752 107 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 RNU6-1064P-201ENST00000410626 104 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 HMGN2P38-201ENST00000423806 265 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 RNU7-45P-201ENST00000459460 63 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 AC079804.2-201ENST00000490376 200 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 RNU6-322P-201ENST00000516010 103 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 MTND5P34-201ENST00000568888 325 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 MIR4764-201ENST00000580680 88 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 AC021443.1-201ENST00000604478 211 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 MTND5P18-201ENST00000445624 1801 ntBASIC1.77□□□□□ -2.13
CLRN1P58418 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
CLRN1P58418 Y_RNA.346-201ENST00000365385 112 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 Y_RNA.528-201ENST00000384575 108 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 Y_RNA.537-201ENST00000384626 109 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 RNU6-476P-201ENST00000384726 107 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 MIR520C-201ENST00000385005 87 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CLRN1P58418 AL451046.2-201ENST00000403074 277 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 RNA5SP233-201ENST00000459153 113 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 RNU7-43P-201ENST00000516554 64 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 AL627230.6-201ENST00000611129 280 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 AC092881.1-201ENST00000638218 2733 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 AP000648.3-201ENST00000623539 4507 ntBASIC1.76□□□□□ -2.13
CLRN1P58418 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
CLRN1P58418 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLRN1P58418 HMGN2P23-201ENST00000456759 269 ntBASIC1.75□□□□□ -2.13
CLRN1P58418 AC005908.1-201ENST00000468701 347 ntBASIC1.75□□□□□ -2.13
CLRN1P58418 RNY4P20-201ENST00000516678 93 ntBASIC1.75□□□□□ -2.13
CLRN1P58418 RNU7-53P-201ENST00000516705 60 ntBASIC1.75□□□□□ -2.13
CLRN1P58418 MIR4305-201ENST00000583252 102 ntBASIC1.75□□□□□ -2.13
CLRN1P58418 AL121890.5-201ENST00000620848 304 ntBASIC1.75□□□□□ -2.13
CLRN1P58418 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CLRN1P58418 RNU6-1325P-201ENST00000364905 105 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 RNU6-1144P-201ENST00000384247 104 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 SNORA51.10-201ENST00000384418 136 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 SNORD41-201ENST00000386967 70 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 MIR1261-201ENST00000408659 82 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 RNA5SP136-201ENST00000410906 107 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CLRN1P58418 RNU7-164P-201ENST00000459221 62 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 RPL23AP42-201ENST00000471152 471 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.74□□□□□ -2.13
CLRN1P58418 RNU6-922P-201ENST00000516753 99 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 MIR5089-201ENST00000580047 84 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 AL670379.3-201ENST00000605040 251 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.74□□□□□ -2.13
CLRN1P58418 MIR6129-201ENST00000616087 109 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 MIR8063-201ENST00000621930 81 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 AC021613.1-201ENST00000623880 111 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 AC008133.2-201ENST00000624540 351 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 AP000553.5-201ENST00000641933 54 ntBASIC1.74□□□□□ -2.13
CLRN1P58418 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CLRN1P58418 Y_RNA.298-201ENST00000364960 107 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 RNU6-215P-201ENST00000365169 102 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 RNU6-429P-201ENST00000384582 108 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 MIR548A3-201ENST00000385297 97 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
CLRN1P58418 RNU6-913P-201ENST00000390913 95 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.73□□□□□ -2.13
CLRN1P58418 RNU7-73P-201ENST00000458743 63 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 MIR4648-201ENST00000580107 72 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 MIR3683-201ENST00000580847 82 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 AL513534.2-201ENST00000603836 250 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 MIR6715A-201ENST00000615929 79 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 AC131280.1-202ENST00000624067 4211 ntBASIC1.73□□□□□ -2.13
CLRN1P58418 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
CLRN1P58418 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 RNU6-1190P-201ENST00000410811 104 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 HMGN2P19-201ENST00000425149 265 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 snoU13.9-201ENST00000458927 103 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 Y_RNA.649-201ENST00000459077 103 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 COX6CP6-201ENST00000490840 228 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 RNU7-123P-201ENST00000515911 60 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 RNU2-35P-201ENST00000516446 142 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 AL096840.1-201ENST00000603287 93 ntBASIC1.72□□□□□ -2.13
CLRN1P58418 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
CLRN1P58418 AL391516.1-201ENST00000554380 2449 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 271.5 ms