Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 RNU6-693P-201ENST00000516134 107 ntBASIC0.14□□□□□ -2.39
VSX2P58304 RNU6-397P-201ENST00000516226 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 MIR4431-201ENST00000579990 94 ntBASIC0.14□□□□□ -2.39
VSX2P58304 SNORD92-201ENST00000585078 85 ntBASIC0.14□□□□□ -2.39
VSX2P58304 U6.90-201ENST00000614007 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 AC013791.1-201ENST00000616619 62 ntBASIC0.14□□□□□ -2.39
VSX2P58304 U6.70-201ENST00000620287 104 ntBASIC0.14□□□□□ -2.39
VSX2P58304 Y_RNA.105-201ENST00000363182 111 ntBASIC0.13□□□□□ -2.39
VSX2P58304 RNA5SP62-201ENST00000363457 110 ntBASIC0.13□□□□□ -2.39
VSX2P58304 RNU4-10P-201ENST00000364383 140 ntBASIC0.13□□□□□ -2.39
VSX2P58304 Y_RNA.242-201ENST00000364473 110 ntBASIC0.13□□□□□ -2.39
VSX2P58304 Y_RNA.424-201ENST00000384063 103 ntBASIC0.13□□□□□ -2.39
VSX2P58304 SNORA27-201ENST00000384323 126 ntBASIC0.13□□□□□ -2.39
VSX2P58304 Y_RNA.476-201ENST00000384347 108 ntBASIC0.13□□□□□ -2.39
VSX2P58304 Y_RNA.579-201ENST00000390939 94 ntBASIC0.13□□□□□ -2.39
VSX2P58304 RNU6-1248P-201ENST00000391096 64 ntBASIC0.13□□□□□ -2.39
VSX2P58304 RNU6-507P-201ENST00000516045 100 ntBASIC0.13□□□□□ -2.39
VSX2P58304 RNU6-875P-201ENST00000516488 106 ntBASIC0.13□□□□□ -2.39
VSX2P58304 Y_RNA.715-201ENST00000517082 110 ntBASIC0.13□□□□□ -2.39
VSX2P58304 MIR5692C2-201ENST00000577959 77 ntBASIC0.13□□□□□ -2.39
VSX2P58304 C8orf59P2-201ENST00000603441 271 ntBASIC0.13□□□□□ -2.39
VSX2P58304 MIR30D-201ENST00000362283 70 ntBASIC0.12□□□□□ -2.39
VSX2P58304 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
VSX2P58304 SNORA36.1-201ENST00000363424 132 ntBASIC0.12□□□□□ -2.39
VSX2P58304 Y_RNA.136-201ENST00000363444 102 ntBASIC0.12□□□□□ -2.39
VSX2P58304 Y_RNA.569-201ENST00000384749 103 ntBASIC0.12□□□□□ -2.39
VSX2P58304 Y_RNA.572-201ENST00000384757 98 ntBASIC0.12□□□□□ -2.39
VSX2P58304 MIR563-201ENST00000385080 79 ntBASIC0.12□□□□□ -2.39
VSX2P58304 SNORD115-46-201ENST00000390982 71 ntBASIC0.12□□□□□ -2.39
VSX2P58304 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
VSX2P58304 AC087499.4-201ENST00000448505 178 ntBASIC0.12□□□□□ -2.39
VSX2P58304 AC023449.1-201ENST00000454464 154 ntBASIC0.12□□□□□ -2.39
VSX2P58304 MTCO2P24-201ENST00000515611 426 ntBASIC0.12□□□□□ -2.39
VSX2P58304 RNU6-976P-201ENST00000516086 111 ntBASIC0.12□□□□□ -2.39
VSX2P58304 SNORD77.4-201ENST00000516158 81 ntBASIC0.12□□□□□ -2.39
VSX2P58304 Y_RNA.713-201ENST00000517013 96 ntBASIC0.12□□□□□ -2.39
VSX2P58304 AP003327.1-201ENST00000529684 127 ntBASIC0.12□□□□□ -2.39
VSX2P58304 AL138825.1-201ENST00000618587 192 ntBASIC0.12□□□□□ -2.39
VSX2P58304 AC112487.2-201ENST00000637950 304 ntBASIC0.12□□□□□ -2.39
VSX2P58304 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
VSX2P58304 Y_RNA.70-201ENST00000362886 110 ntBASIC0.11□□□□□ -2.39
VSX2P58304 Y_RNA.356-201ENST00000365475 113 ntBASIC0.11□□□□□ -2.39
VSX2P58304 SNORA8.2-201ENST00000384372 139 ntBASIC0.11□□□□□ -2.39
VSX2P58304 Y_RNA.645-201ENST00000391229 102 ntBASIC0.11□□□□□ -2.39
VSX2P58304 RNA5SP496-201ENST00000391240 109 ntBASIC0.11□□□□□ -2.39
VSX2P58304 MIR1302-11-201ENST00000408051 138 ntBASIC0.11□□□□□ -2.39
VSX2P58304 MIR1302-9-201ENST00000408365 138 ntBASIC0.11□□□□□ -2.39
VSX2P58304 MIR1302-10-201ENST00000408734 138 ntBASIC0.11□□□□□ -2.39
VSX2P58304 RNU6-121P-201ENST00000410525 99 ntBASIC0.11□□□□□ -2.39
VSX2P58304 AF228730.3-201ENST00000436691 102 ntBASIC0.11□□□□□ -2.39
VSX2P58304 Y_RNA.639-201ENST00000458981 102 ntBASIC0.11□□□□□ -2.39
VSX2P58304 MIR1302-2-201ENST00000607096 138 ntBASIC0.11□□□□□ -2.39
VSX2P58304 Y_RNA.197-201ENST00000364004 102 ntBASIC0.1□□□□□ -2.39
VSX2P58304 Y_RNA.251-201ENST00000364551 99 ntBASIC0.1□□□□□ -2.39
VSX2P58304 SNORA63C-201ENST00000364578 129 ntBASIC0.1□□□□□ -2.39
VSX2P58304 RNU6-740P-201ENST00000364734 105 ntBASIC0.1□□□□□ -2.39
VSX2P58304 MIR644A-201ENST00000385262 94 ntBASIC0.1□□□□□ -2.39
VSX2P58304 Y_RNA.617-201ENST00000410920 90 ntBASIC0.1□□□□□ -2.39
VSX2P58304 PMCHL1-202ENST00000423102 261 ntBASIC0.1□□□□□ -2.39
VSX2P58304 RPS29P24-201ENST00000486345 171 ntBASIC0.1□□□□□ -2.39
VSX2P58304 RNU6-1270P-201ENST00000517128 108 ntBASIC0.1□□□□□ -2.39
VSX2P58304 RNU6-897P-201ENST00000517135 105 ntBASIC0.1□□□□□ -2.39
VSX2P58304 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.1□□□□□ -2.39
VSX2P58304 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.1□□□□□ -2.39
VSX2P58304 AC133485.4-201ENST00000561835 220 ntBASIC0.1□□□□□ -2.39
VSX2P58304 MIR376A1-201ENST00000616574 68 ntBASIC0.1□□□□□ -2.39
VSX2P58304 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.1□□□□□ -2.39
VSX2P58304 Y_RNA.14-201ENST00000362415 103 ntBASIC0.09□□□□□ -2.4
VSX2P58304 SNORA1.1-201ENST00000364671 133 ntBASIC0.09□□□□□ -2.4
VSX2P58304 Y_RNA.293-201ENST00000364908 93 ntBASIC0.09□□□□□ -2.4
VSX2P58304 RNA5SP117-201ENST00000365294 118 ntBASIC0.09□□□□□ -2.4
VSX2P58304 Y_RNA.380-201ENST00000365663 111 ntBASIC0.09□□□□□ -2.4
VSX2P58304 RNU6-662P-201ENST00000384253 104 ntBASIC0.09□□□□□ -2.4
VSX2P58304 MIR1257-201ENST00000408490 117 ntBASIC0.09□□□□□ -2.4
VSX2P58304 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.09□□□□□ -2.4
VSX2P58304 RNU7-45P-201ENST00000459460 63 ntBASIC0.09□□□□□ -2.4
VSX2P58304 RNU2-31P-201ENST00000516954 155 ntBASIC0.09□□□□□ -2.4
VSX2P58304 RNU6-448P-201ENST00000517052 107 ntBASIC0.09□□□□□ -2.4
VSX2P58304 AC100767.1-201ENST00000528178 123 ntBASIC0.09□□□□□ -2.4
VSX2P58304 MIR4724-201ENST00000579485 89 ntBASIC0.09□□□□□ -2.4
VSX2P58304 RAC1P9-201ENST00000604990 392 ntBASIC0.09□□□□□ -2.4
VSX2P58304 uc_338.22-201ENST00000622722 187 ntBASIC0.09□□□□□ -2.4
VSX2P58304 RNU6-597P-201ENST00000365620 102 ntBASIC0.08□□□□□ -2.4
VSX2P58304 Y_RNA.394-201ENST00000383942 103 ntBASIC0.08□□□□□ -2.4
VSX2P58304 Y_RNA.526-201ENST00000384572 110 ntBASIC0.08□□□□□ -2.4
VSX2P58304 Y_RNA.567-201ENST00000384736 106 ntBASIC0.08□□□□□ -2.4
VSX2P58304 SNORD71-201ENST00000411292 86 ntBASIC0.08□□□□□ -2.4
VSX2P58304 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.08□□□□□ -2.4
VSX2P58304 RNU2-11P-201ENST00000459191 187 ntBASIC0.08□□□□□ -2.4
VSX2P58304 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
VSX2P58304 AC069113.3-201ENST00000521019 150 ntBASIC0.08□□□□□ -2.4
VSX2P58304 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.08□□□□□ -2.4
VSX2P58304 AP001282.2-201ENST00000616149 309 ntBASIC0.08□□□□□ -2.4
VSX2P58304 MIR8066-201ENST00000617280 78 ntBASIC0.08□□□□□ -2.4
VSX2P58304 snoU18.1-201ENST00000629629 71 ntBASIC0.08□□□□□ -2.4
VSX2P58304 Y_RNA.7-201ENST00000362352 102 ntBASIC0.07□□□□□ -2.4
VSX2P58304 Y_RNA.31-201ENST00000362574 102 ntBASIC0.07□□□□□ -2.4
VSX2P58304 RNU6-1272P-201ENST00000362776 107 ntBASIC0.07□□□□□ -2.4
VSX2P58304 Y_RNA.183-201ENST00000363882 113 ntBASIC0.07□□□□□ -2.4
VSX2P58304 RNU6-450P-201ENST00000364654 107 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms