Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 Y_RNA.542-201ENST00000384641 111 ntBASIC1.02□□□□□ -2.25
PAX9P55771 SNORA40.5-201ENST00000391061 128 ntBASIC1.02□□□□□ -2.25
PAX9P55771 SNORA75.2-201ENST00000391138 150 ntBASIC1.02□□□□□ -2.25
PAX9P55771 SNORA75.3-201ENST00000391231 150 ntBASIC1.02□□□□□ -2.25
PAX9P55771 RNU1-123P-201ENST00000458950 160 ntBASIC1.02□□□□□ -2.25
PAX9P55771 AC074198.2-201ENST00000508153 258 ntBASIC1.02□□□□□ -2.25
PAX9P55771 SNORA31.4-201ENST00000516049 129 ntBASIC1.02□□□□□ -2.25
PAX9P55771 SNORD116-25-201ENST00000516517 92 ntBASIC1.02□□□□□ -2.25
PAX9P55771 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
PAX9P55771 AL022345.2-201ENST00000606307 135 ntBASIC1.02□□□□□ -2.25
PAX9P55771 ZNF209P-201ENST00000593450 2304 ntBASIC1.01□□□□□ -2.25
PAX9P55771 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
PAX9P55771 RNU6-1336P-201ENST00000383886 109 ntBASIC1.01□□□□□ -2.25
PAX9P55771 RNU6-1189P-201ENST00000383958 107 ntBASIC1.01□□□□□ -2.25
PAX9P55771 Y_RNA.410-201ENST00000383992 113 ntBASIC1.01□□□□□ -2.25
PAX9P55771 SNORA27-201ENST00000384323 126 ntBASIC1.01□□□□□ -2.25
PAX9P55771 AL392103.1-201ENST00000447000 198 ntBASIC1.01□□□□□ -2.25
PAX9P55771 RN7SKP179-201ENST00000516126 217 ntBASIC1.01□□□□□ -2.25
PAX9P55771 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.01□□□□□ -2.25
PAX9P55771 RNU6-1292P-201ENST00000383856 107 ntBASIC1□□□□□ -2.25
PAX9P55771 SNORA70.7-201ENST00000384159 133 ntBASIC1□□□□□ -2.25
PAX9P55771 SNORA25-201ENST00000384384 134 ntBASIC1□□□□□ -2.25
PAX9P55771 RNU6-768P-201ENST00000384683 107 ntBASIC1□□□□□ -2.25
PAX9P55771 SNORA17.3-201ENST00000391159 129 ntBASIC1□□□□□ -2.25
PAX9P55771 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1□□□□□ -2.25
PAX9P55771 AC108059.2-201ENST00000434626 151 ntBASIC1□□□□□ -2.25
PAX9P55771 AC004223.1-201ENST00000479840 271 ntBASIC1□□□□□ -2.25
PAX9P55771 RPS29P24-201ENST00000486345 171 ntBASIC1□□□□□ -2.25
PAX9P55771 SNORD79.1-201ENST00000516069 84 ntBASIC1□□□□□ -2.25
PAX9P55771 AC019288.1-201ENST00000557918 224 ntBASIC1□□□□□ -2.25
PAX9P55771 MIR5197-201ENST00000583721 112 ntBASIC1□□□□□ -2.25
PAX9P55771 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
PAX9P55771 MIR103A2-201ENST00000362154 78 ntBASIC0.99□□□□□ -2.25
PAX9P55771 RNU6-597P-201ENST00000365620 102 ntBASIC0.99□□□□□ -2.25
PAX9P55771 RNU6-913P-201ENST00000390913 95 ntBASIC0.99□□□□□ -2.25
PAX9P55771 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
PAX9P55771 SNORA70.22-201ENST00000517160 124 ntBASIC0.99□□□□□ -2.25
PAX9P55771 AL512598.1-201ENST00000610158 273 ntBASIC0.99□□□□□ -2.25
PAX9P55771 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
PAX9P55771 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.98□□□□□ -2.25
PAX9P55771 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PAX9P55771 RNU4-84P-201ENST00000364200 139 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU6-1082P-201ENST00000364574 107 ntBASIC0.98□□□□□ -2.25
PAX9P55771 Y_RNA.393-201ENST00000383936 102 ntBASIC0.98□□□□□ -2.25
PAX9P55771 Y_RNA.441-201ENST00000384123 112 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU6-1067P-201ENST00000384752 107 ntBASIC0.98□□□□□ -2.25
PAX9P55771 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
PAX9P55771 RNU6-482P-201ENST00000391068 107 ntBASIC0.98□□□□□ -2.25
PAX9P55771 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.98□□□□□ -2.25
PAX9P55771 RNU4-62P-201ENST00000410125 130 ntBASIC0.98□□□□□ -2.25
PAX9P55771 AC090844.1-201ENST00000422019 156 ntBASIC0.98□□□□□ -2.25
PAX9P55771 AC108667.1-201ENST00000428618 249 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU7-67P-201ENST00000459003 62 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU7-21P-201ENST00000459430 62 ntBASIC0.98□□□□□ -2.25
PAX9P55771 AC107297.1-201ENST00000459991 176 ntBASIC0.98□□□□□ -2.25
PAX9P55771 AC107027.2-201ENST00000512197 115 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU6-998P-201ENST00000515894 101 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU7-121P-201ENST00000516604 62 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU6-958P-201ENST00000516995 106 ntBASIC0.98□□□□□ -2.25
PAX9P55771 MIR3660-201ENST00000584845 100 ntBASIC0.98□□□□□ -2.25
PAX9P55771 FTX_2.1-201ENST00000618816 94 ntBASIC0.98□□□□□ -2.25
PAX9P55771 RNU6-654P-201ENST00000364373 107 ntBASIC0.97□□□□□ -2.25
PAX9P55771 Y_RNA.521-201ENST00000384560 114 ntBASIC0.97□□□□□ -2.25
PAX9P55771 MIR624-201ENST00000385217 97 ntBASIC0.97□□□□□ -2.25
PAX9P55771 SNORA40.6-201ENST00000391153 128 ntBASIC0.97□□□□□ -2.25
PAX9P55771 PCNPP3-201ENST00000393579 471 ntBASIC0.97□□□□□ -2.25
PAX9P55771 RNA5SP127-201ENST00000411051 133 ntBASIC0.97□□□□□ -2.25
PAX9P55771 RNU7-73P-201ENST00000458743 63 ntBASIC0.97□□□□□ -2.25
PAX9P55771 AC005840.1-201ENST00000498412 377 ntBASIC0.97□□□□□ -2.25
PAX9P55771 Y_RNA.662-201ENST00000516028 97 ntBASIC0.97□□□□□ -2.25
PAX9P55771 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.97□□□□□ -2.25
PAX9P55771 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.97□□□□□ -2.25
PAX9P55771 MIR4421-201ENST00000578133 69 ntBASIC0.97□□□□□ -2.25
PAX9P55771 MIR6516-201ENST00000630554 81 ntBASIC0.97□□□□□ -2.25
PAX9P55771 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.97□□□□□ -2.25
PAX9P55771 MIR3658-201ENST00000636291 56 ntBASIC0.97□□□□□ -2.25
PAX9P55771 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
PAX9P55771 SNORA80D-201ENST00000384488 135 ntBASIC0.96□□□□□ -2.26
PAX9P55771 RNU6-239P-201ENST00000390990 99 ntBASIC0.96□□□□□ -2.26
PAX9P55771 RNU6-1190P-201ENST00000410811 104 ntBASIC0.96□□□□□ -2.26
PAX9P55771 RNU6-1135P-201ENST00000411083 103 ntBASIC0.96□□□□□ -2.26
PAX9P55771 AL035398.1-201ENST00000430869 322 ntBASIC0.96□□□□□ -2.26
PAX9P55771 snoU13.16-201ENST00000459350 104 ntBASIC0.96□□□□□ -2.26
PAX9P55771 RNU7-96P-201ENST00000459535 64 ntBASIC0.96□□□□□ -2.26
PAX9P55771 SCARNA15-202ENST00000516881 127 ntBASIC0.96□□□□□ -2.26
PAX9P55771 RNU6-182P-201ENST00000516970 105 ntBASIC0.96□□□□□ -2.26
PAX9P55771 MIR4769-201ENST00000584126 77 ntBASIC0.96□□□□□ -2.26
PAX9P55771 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
PAX9P55771 SEPT14P17-201ENST00000617978 177 ntBASIC0.96□□□□□ -2.26
PAX9P55771 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.96□□□□□ -2.26
PAX9P55771 MIR378A-201ENST00000362177 66 ntBASIC0.95□□□□□ -2.26
PAX9P55771 MIR342-201ENST00000362212 99 ntBASIC0.95□□□□□ -2.26
PAX9P55771 Y_RNA.150-201ENST00000363562 102 ntBASIC0.95□□□□□ -2.26
PAX9P55771 SNORA25.7-201ENST00000364375 127 ntBASIC0.95□□□□□ -2.26
PAX9P55771 Y_RNA.337-201ENST00000365312 102 ntBASIC0.95□□□□□ -2.26
PAX9P55771 Y_RNA.357-201ENST00000365487 109 ntBASIC0.95□□□□□ -2.26
PAX9P55771 MIR222-201ENST00000384992 110 ntBASIC0.95□□□□□ -2.26
PAX9P55771 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
PAX9P55771 MIR1285-1-201ENST00000408593 84 ntBASIC0.95□□□□□ -2.26
PAX9P55771 AL591704.2-201ENST00000421658 181 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 287.8 ms