Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
SMSP52788 AC131281.1-201ENST00000522984 164 ntBASIC0.52□□□□□ -2.33
SMSP52788 AC113195.1-201ENST00000579952 141 ntBASIC0.52□□□□□ -2.33
SMSP52788 AL008718.3-201ENST00000610217 321 ntBASIC0.52□□□□□ -2.33
SMSP52788 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.52□□□□□ -2.33
SMSP52788 snoU18.1-201ENST00000629629 71 ntBASIC0.52□□□□□ -2.33
SMSP52788 Z97988.1-201ENST00000637697 135 ntBASIC0.52□□□□□ -2.33
SMSP52788 Y_RNA.37-201ENST00000362606 108 ntBASIC0.51□□□□□ -2.33
SMSP52788 Y_RNA.251-201ENST00000364551 99 ntBASIC0.51□□□□□ -2.33
SMSP52788 Y_RNA.293-201ENST00000364908 93 ntBASIC0.51□□□□□ -2.33
SMSP52788 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
SMSP52788 RNU6-662P-201ENST00000384253 104 ntBASIC0.51□□□□□ -2.33
SMSP52788 MIR518F-201ENST00000384973 87 ntBASIC0.51□□□□□ -2.33
SMSP52788 MIR548P-201ENST00000408336 84 ntBASIC0.51□□□□□ -2.33
SMSP52788 RNU2-55P-201ENST00000411146 174 ntBASIC0.51□□□□□ -2.33
SMSP52788 AC090844.1-201ENST00000422019 156 ntBASIC0.51□□□□□ -2.33
SMSP52788 SNORA18.4-201ENST00000516440 124 ntBASIC0.51□□□□□ -2.33
SMSP52788 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
SMSP52788 RNU7-53P-201ENST00000516705 60 ntBASIC0.51□□□□□ -2.33
SMSP52788 RNA5SP330-201ENST00000517096 96 ntBASIC0.51□□□□□ -2.33
SMSP52788 AP003733.2-201ENST00000529409 171 ntBASIC0.51□□□□□ -2.33
SMSP52788 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
SMSP52788 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.5□□□□□ -2.33
SMSP52788 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNU6-888P-201ENST00000363010 101 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNU6-716P-201ENST00000365621 103 ntBASIC0.5□□□□□ -2.33
SMSP52788 Y_RNA.535-201ENST00000384612 99 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNU6-1237P-201ENST00000384777 107 ntBASIC0.5□□□□□ -2.33
SMSP52788 MIR215-201ENST00000384858 110 ntBASIC0.5□□□□□ -2.33
SMSP52788 MIR548A2-201ENST00000384956 97 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNA5SP127-201ENST00000411051 133 ntBASIC0.5□□□□□ -2.33
SMSP52788 RPL21P38-201ENST00000418090 167 ntBASIC0.5□□□□□ -2.33
SMSP52788 snoU13.21-201ENST00000459368 105 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNY3P15-201ENST00000516297 97 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNU6-977P-201ENST00000516411 103 ntBASIC0.5□□□□□ -2.33
SMSP52788 RNU6-365P-201ENST00000517113 106 ntBASIC0.5□□□□□ -2.33
SMSP52788 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.5□□□□□ -2.33
SMSP52788 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.5□□□□□ -2.33
SMSP52788 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SMSP52788 SNORA27-201ENST00000384323 126 ntBASIC0.49□□□□□ -2.33
SMSP52788 SNORD38B-201ENST00000384690 67 ntBASIC0.49□□□□□ -2.33
SMSP52788 SNORA26-201ENST00000391286 122 ntBASIC0.49□□□□□ -2.33
SMSP52788 MTCO2P12-201ENST00000427426 682 ntBASIC0.49□□□□□ -2.33
SMSP52788 AC098934.3-201ENST00000430450 190 ntBASIC0.49□□□□□ -2.33
SMSP52788 MIR18B-201ENST00000454574 71 ntBASIC0.49□□□□□ -2.33
SMSP52788 RNU7-62P-201ENST00000458856 62 ntBASIC0.49□□□□□ -2.33
SMSP52788 SERF1AP1-201ENST00000514575 187 ntBASIC0.49□□□□□ -2.33
SMSP52788 RNU6-693P-201ENST00000516134 107 ntBASIC0.49□□□□□ -2.33
SMSP52788 RNU6-958P-201ENST00000516995 106 ntBASIC0.49□□□□□ -2.33
SMSP52788 MIR4804-201ENST00000581683 73 ntBASIC0.49□□□□□ -2.33
SMSP52788 AL109933.3-201ENST00000619095 188 ntBASIC0.49□□□□□ -2.33
SMSP52788 SNORD38B-202ENST00000625943 69 ntBASIC0.49□□□□□ -2.33
SMSP52788 Y_RNA.61-201ENST00000362835 102 ntBASIC0.48□□□□□ -2.33
SMSP52788 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
SMSP52788 Y_RNA.210-201ENST00000364161 110 ntBASIC0.48□□□□□ -2.33
SMSP52788 SNORD61-201ENST00000384252 73 ntBASIC0.48□□□□□ -2.33
SMSP52788 SNORA8.3-201ENST00000384679 139 ntBASIC0.48□□□□□ -2.33
SMSP52788 MIR520F-201ENST00000384824 87 ntBASIC0.48□□□□□ -2.33
SMSP52788 MIR520H-201ENST00000385126 88 ntBASIC0.48□□□□□ -2.33
SMSP52788 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
SMSP52788 RNU6-913P-201ENST00000390913 95 ntBASIC0.48□□□□□ -2.33
SMSP52788 SNORD83.1-201ENST00000411362 77 ntBASIC0.48□□□□□ -2.33
SMSP52788 AC114737.2-201ENST00000421583 173 ntBASIC0.48□□□□□ -2.33
SMSP52788 AL358176.2-201ENST00000425769 204 ntBASIC0.48□□□□□ -2.33
SMSP52788 RPS29P24-201ENST00000486345 171 ntBASIC0.48□□□□□ -2.33
SMSP52788 RNU6-504P-201ENST00000516568 104 ntBASIC0.48□□□□□ -2.33
SMSP52788 AC100767.1-201ENST00000528178 123 ntBASIC0.48□□□□□ -2.33
SMSP52788 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.48□□□□□ -2.33
SMSP52788 AC243829.6-201ENST00000612652 106 ntBASIC0.48□□□□□ -2.33
SMSP52788 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.48□□□□□ -2.33
SMSP52788 Y_RNA.84-201ENST00000363011 104 ntBASIC0.47□□□□□ -2.33
SMSP52788 RNU6-806P-201ENST00000365147 105 ntBASIC0.47□□□□□ -2.33
SMSP52788 RNY3P5-201ENST00000384127 102 ntBASIC0.47□□□□□ -2.33
SMSP52788 MIR626-201ENST00000385032 94 ntBASIC0.47□□□□□ -2.33
SMSP52788 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.47□□□□□ -2.33
SMSP52788 MIR4771-2-201ENST00000577758 74 ntBASIC0.47□□□□□ -2.33
SMSP52788 MIR4680-201ENST00000580906 66 ntBASIC0.47□□□□□ -2.33
SMSP52788 MIR4771-1-201ENST00000582617 74 ntBASIC0.47□□□□□ -2.33
SMSP52788 MIR4676-201ENST00000583078 72 ntBASIC0.47□□□□□ -2.33
SMSP52788 AC006006.1-201ENST00000603082 144 ntBASIC0.47□□□□□ -2.33
SMSP52788 Y_RNA.66-201ENST00000362862 102 ntBASIC0.46□□□□□ -2.34
SMSP52788 Y_RNA.258-201ENST00000364613 105 ntBASIC0.46□□□□□ -2.34
SMSP52788 Y_RNA.410-201ENST00000383992 113 ntBASIC0.46□□□□□ -2.34
SMSP52788 SNORA36.2-201ENST00000384004 127 ntBASIC0.46□□□□□ -2.34
SMSP52788 RNU6-211P-201ENST00000384047 107 ntBASIC0.46□□□□□ -2.34
SMSP52788 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
SMSP52788 Y_RNA.527-201ENST00000384573 102 ntBASIC0.46□□□□□ -2.34
SMSP52788 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
SMSP52788 RNU7-96P-201ENST00000459535 64 ntBASIC0.46□□□□□ -2.34
SMSP52788 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.46□□□□□ -2.34
SMSP52788 Y_RNA.64-201ENST00000362845 102 ntBASIC0.45□□□□□ -2.34
SMSP52788 Y_RNA.138-201ENST00000363462 102 ntBASIC0.45□□□□□ -2.34
SMSP52788 Y_RNA.229-201ENST00000364347 113 ntBASIC0.45□□□□□ -2.34
SMSP52788 Y_RNA.275-201ENST00000364726 110 ntBASIC0.45□□□□□ -2.34
SMSP52788 VTRNA1-3-201ENST00000365645 89 ntBASIC0.45□□□□□ -2.34
SMSP52788 RNY1P8-201ENST00000383970 114 ntBASIC0.45□□□□□ -2.34
SMSP52788 RNU6-1338P-201ENST00000516328 91 ntBASIC0.45□□□□□ -2.34
SMSP52788 RNA5SP153-201ENST00000516498 76 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms