Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 RN7SKP179-201ENST00000516126 217 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 RNU6-861P-201ENST00000516745 106 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 RNU6-1212P-201ENST00000517023 104 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 AC022559.1-201ENST00000520905 205 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 MIR5197-201ENST00000583721 112 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 MIR3192-201ENST00000584920 77 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 AL645939.4-201ENST00000604495 135 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 AC090425.1-201ENST00000610007 140 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 AC008133.2-201ENST00000624540 351 ntBASIC1.09□□□□□ -2.23
NKX2-1P43699 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
NKX2-1P43699 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
NKX2-1P43699 RNU1-17P-201ENST00000363022 152 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 Y_RNA.357-201ENST00000365487 109 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 SNORD28B-201ENST00000390993 75 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 RNA5SP127-201ENST00000411051 133 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 RNU7-96P-201ENST00000459535 64 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 SNORA18.4-201ENST00000516440 124 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 AC019288.1-201ENST00000557918 224 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 AC068338.1-201ENST00000565567 176 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 MIR3668-201ENST00000582138 75 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 AL022345.2-201ENST00000606307 135 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 MIR4791-201ENST00000607666 84 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
NKX2-1P43699 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.07□□□□□ -2.24
NKX2-1P43699 SNORA27-201ENST00000384323 126 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 RNU5E-9P-201ENST00000411164 104 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 MTND5P15-201ENST00000434246 349 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 SEPT7P4-201ENST00000437076 306 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 snoU13.16-201ENST00000459350 104 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 AC048334.1-201ENST00000477975 159 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 RNU6-947P-201ENST00000516264 106 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 RNU7-181P-201ENST00000517234 74 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 MIR8055-201ENST00000610739 97 ntBASIC1.07□□□□□ -2.24
NKX2-1P43699 RNA5SP264-201ENST00000363115 107 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 RNU1-124P-201ENST00000363861 145 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 Y_RNA.494-201ENST00000384432 111 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 SNORA80D-201ENST00000384488 135 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 RNU6-939P-201ENST00000384634 107 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 MIR548I3-201ENST00000408378 149 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 MIR548I1-201ENST00000408810 149 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.06□□□□□ -2.24
NKX2-1P43699 RPS29P24-201ENST00000486345 171 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 RNU6-998P-201ENST00000515894 101 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 RNU7-41P-201ENST00000515917 61 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 SCARNA15-202ENST00000516881 127 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 RNU6-1270P-201ENST00000517128 108 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 MIR4303-201ENST00000581299 66 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 DNAJC19P2-201ENST00000593340 302 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 AL353997.5-201ENST00000618886 171 ntBASIC1.06□□□□□ -2.24
NKX2-1P43699 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
NKX2-1P43699 Y_RNA.272-201ENST00000364696 102 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 MIR19B1-201ENST00000384829 87 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 SNORA75.5-201ENST00000391291 81 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 MIR1302-7-201ENST00000408841 72 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 AC006461.1-201ENST00000412637 326 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 RNU7-80P-201ENST00000459562 61 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 SNORD79.1-201ENST00000516069 84 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 SNORD36C-201ENST00000516733 66 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 AC090821.2-201ENST00000523552 176 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 AC243994.1-201ENST00000618627 109 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 MIR4251-201ENST00000635819 61 ntBASIC1.05□□□□□ -2.24
NKX2-1P43699 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.05□□□□□ -2.24
NKX2-1P43699 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
NKX2-1P43699 Y_RNA.241-201ENST00000364470 117 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 Y_RNA.454-201ENST00000384224 113 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 SNORA51.10-201ENST00000384418 136 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 RNU6-768P-201ENST00000384683 107 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 RNU6-910P-201ENST00000390844 107 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 AL035398.1-201ENST00000430869 322 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 RNA5SP458-201ENST00000516188 119 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 RNU7-53P-201ENST00000516705 60 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 RNA5SP404-201ENST00000517118 132 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 AC015712.3-201ENST00000559380 164 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 MIR3129-201ENST00000581095 76 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 MIR4769-201ENST00000584126 77 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 AP000942.3-201ENST00000603702 160 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 MTND1P7-201ENST00000632801 297 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 MIR376A2-201ENST00000636782 80 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 ZNF209P-201ENST00000593450 2304 ntBASIC1.04□□□□□ -2.24
NKX2-1P43699 Y_RNA.270-201ENST00000364693 104 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 MT-TN-201ENST00000387400 73 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 SNORA17.3-201ENST00000391159 129 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 AL591704.2-201ENST00000421658 181 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 RNU1-123P-201ENST00000458950 160 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX2-1P43699 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.03□□□□□ -2.24
NKX2-1P43699 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.03□□□□□ -2.24
NKX2-1P43699 Z97988.1-201ENST00000637697 135 ntBASIC1.03□□□□□ -2.24
NKX2-1P43699 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
NKX2-1P43699 RNU6-580P-201ENST00000365159 107 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 Y_RNA.363-201ENST00000365529 113 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 Y_RNA.430-201ENST00000384081 110 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 Y_RNA.521-201ENST00000384560 114 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 MIR222-201ENST00000384992 110 ntBASIC1.02□□□□□ -2.25
NKX2-1P43699 MIR1185-1-201ENST00000408598 86 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms