Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 Y_RNA.241-201ENST00000364470 117 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 RNU6-1135P-201ENST00000411083 103 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.31□□□□□ -2.2
PTPN9P43378 AF228730.3-201ENST00000436691 102 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 AC245047.7-201ENST00000440265 293 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 RNU7-41P-201ENST00000515917 61 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 SNORA31.4-201ENST00000516049 129 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 RNU6-861P-201ENST00000516745 106 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 AC098479.1-201ENST00000609225 154 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 FTX_2.1-201ENST00000618816 94 ntBASIC1.31□□□□□ -2.2
PTPN9P43378 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
PTPN9P43378 SNORA25.7-201ENST00000364375 127 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 Y_RNA.337-201ENST00000365312 102 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 Y_RNA.357-201ENST00000365487 109 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 SNORA1-201ENST00000384107 130 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 MIR624-201ENST00000385217 97 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 RNU6-239P-201ENST00000390990 99 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 SNORD77.3-201ENST00000391113 65 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 RNA5SP127-201ENST00000411051 133 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 AC006461.1-201ENST00000412637 326 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 SEPT7P4-201ENST00000437076 306 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 RPS26P48-201ENST00000491713 339 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 RNU6-947P-201ENST00000516264 106 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 RNU7-121P-201ENST00000516604 62 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 AP003716.2-201ENST00000528260 108 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 MIR4791-201ENST00000607666 84 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 MIR4251-201ENST00000635819 61 ntBASIC1.3□□□□□ -2.2
PTPN9P43378 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.29□□□□□ -2.2
PTPN9P43378 Y_RNA.393-201ENST00000383936 102 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 SNORA27-201ENST00000384323 126 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 SNORA51.10-201ENST00000384418 136 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 AC108729.3-201ENST00000513484 108 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 SNORA18.4-201ENST00000516440 124 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 SNORD36C-201ENST00000516733 66 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 MIR4498-201ENST00000577599 66 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 MIR3646-201ENST00000578301 84 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 MIR3668-201ENST00000582138 75 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 MIR5197-201ENST00000583721 112 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 PRELID3BP2-201ENST00000605362 201 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 AL157834.3-201ENST00000615543 103 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 AL353770.2-201ENST00000620024 78 ntBASIC1.29□□□□□ -2.2
PTPN9P43378 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
PTPN9P43378 Y_RNA.440-201ENST00000384120 114 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 RNU7-96P-201ENST00000459535 64 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 RPS29P24-201ENST00000486345 171 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 RNU11-2P-201ENST00000516898 142 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 MIR3129-201ENST00000581095 76 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 AC243994.1-201ENST00000618627 109 ntBASIC1.28□□□□□ -2.2
PTPN9P43378 Y_RNA.338-201ENST00000365320 114 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 Y_RNA.555-201ENST00000384673 110 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 SNORD12-201ENST00000391002 90 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 RNU5E-9P-201ENST00000411164 104 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 RNU7-73P-201ENST00000458743 63 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 snoU13.16-201ENST00000459350 104 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 AC048334.1-201ENST00000477975 159 ntBASIC1.27□□□□□ -2.21
PTPN9P43378 RNA5SP264-201ENST00000363115 107 ntBASIC1.26□□□□□ -2.21
PTPN9P43378 Y_RNA.521-201ENST00000384560 114 ntBASIC1.26□□□□□ -2.21
PTPN9P43378 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.26□□□□□ -2.21
PTPN9P43378 RNU6-998P-201ENST00000515894 101 ntBASIC1.26□□□□□ -2.21
PTPN9P43378 RNU7-53P-201ENST00000516705 60 ntBASIC1.26□□□□□ -2.21
PTPN9P43378 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.26□□□□□ -2.21
PTPN9P43378 Y_RNA.270-201ENST00000364693 104 ntBASIC1.25□□□□□ -2.21
PTPN9P43378 Y_RNA.494-201ENST00000384432 111 ntBASIC1.25□□□□□ -2.21
PTPN9P43378 SNORA75.5-201ENST00000391291 81 ntBASIC1.25□□□□□ -2.21
PTPN9P43378 AL392103.1-201ENST00000447000 198 ntBASIC1.25□□□□□ -2.21
PTPN9P43378 RNU7-80P-201ENST00000459562 61 ntBASIC1.25□□□□□ -2.21
PTPN9P43378 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.25□□□□□ -2.21
PTPN9P43378 Y_RNA.454-201ENST00000384224 113 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 RNU6-886P-201ENST00000384319 105 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 RNU6-768P-201ENST00000384683 107 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 PCNPP3-201ENST00000393579 471 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 AL035398.1-201ENST00000430869 322 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.24□□□□□ -2.21
PTPN9P43378 DNAJC19P2-201ENST00000593340 302 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 AL359821.1-201ENST00000605519 182 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 MTND1P7-201ENST00000632801 297 ntBASIC1.24□□□□□ -2.21
PTPN9P43378 MIR103A2-201ENST00000362154 78 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 Y_RNA.272-201ENST00000364696 102 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 MIR570-201ENST00000384917 97 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 Y_RNA.580-201ENST00000391004 95 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 RNU7-67P-201ENST00000459003 62 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 AL022345.2-201ENST00000606307 135 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 MIR6078-201ENST00000611069 100 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.23□□□□□ -2.21
PTPN9P43378 MIR376A2-201ENST00000636782 80 ntBASIC1.23□□□□□ -2.21
PTPN9P43378 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
PTPN9P43378 RNA5SP327-201ENST00000362494 101 ntBASIC1.22□□□□□ -2.21
PTPN9P43378 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
PTPN9P43378 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
PTPN9P43378 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
PTPN9P43378 RNU6-907P-201ENST00000390924 102 ntBASIC1.22□□□□□ -2.21
PTPN9P43378 MIR1185-1-201ENST00000408598 86 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms