Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RNU6-365P-201ENST00000517113 106 ntBASIC0.04□□□□□ -2.4
MDH1P40925 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
MDH1P40925 AC124312.5-201ENST00000604451 268 ntBASIC0.04□□□□□ -2.4
MDH1P40925 PART1_1.1-201ENST00000611761 217 ntBASIC0.04□□□□□ -2.4
MDH1P40925 MIR6718-201ENST00000616153 80 ntBASIC0.04□□□□□ -2.4
MDH1P40925 Y_RNA.5-201ENST00000362334 102 ntBASIC0.03□□□□□ -2.4
MDH1P40925 Y_RNA.293-201ENST00000364908 93 ntBASIC0.03□□□□□ -2.4
MDH1P40925 Y_RNA.486-201ENST00000384398 107 ntBASIC0.03□□□□□ -2.4
MDH1P40925 MIR563-201ENST00000385080 79 ntBASIC0.03□□□□□ -2.4
MDH1P40925 RNU2-59P-201ENST00000410482 191 ntBASIC0.03□□□□□ -2.4
MDH1P40925 Y_RNA.602-201ENST00000410535 92 ntBASIC0.03□□□□□ -2.4
MDH1P40925 RNU6-130P-201ENST00000411112 103 ntBASIC0.03□□□□□ -2.4
MDH1P40925 RNU6-938P-201ENST00000411285 103 ntBASIC0.03□□□□□ -2.4
MDH1P40925 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.03□□□□□ -2.4
MDH1P40925 SNORA62.5-201ENST00000516634 120 ntBASIC0.03□□□□□ -2.4
MDH1P40925 AC100767.1-201ENST00000528178 123 ntBASIC0.03□□□□□ -2.4
MDH1P40925 AC133485.4-201ENST00000561835 220 ntBASIC0.03□□□□□ -2.4
MDH1P40925 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.03□□□□□ -2.4
MDH1P40925 MIR5692C2-201ENST00000577959 77 ntBASIC0.03□□□□□ -2.4
MDH1P40925 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.02□□□□□ -2.41
MDH1P40925 SNORA72.1-201ENST00000363485 129 ntBASIC0.02□□□□□ -2.41
MDH1P40925 MIR548I3-201ENST00000408378 149 ntBASIC0.02□□□□□ -2.41
MDH1P40925 SNORD93-201ENST00000408813 74 ntBASIC0.02□□□□□ -2.41
MDH1P40925 RNU6-1046P-201ENST00000516538 107 ntBASIC0.02□□□□□ -2.41
MDH1P40925 RAC1P9-201ENST00000604990 392 ntBASIC0.02□□□□□ -2.41
MDH1P40925 Y_RNA.36-201ENST00000362602 112 ntBASIC0.01□□□□□ -2.41
MDH1P40925 SNORA63.7-201ENST00000365579 123 ntBASIC0.01□□□□□ -2.41
MDH1P40925 Y_RNA.445-201ENST00000384168 102 ntBASIC0.01□□□□□ -2.41
MDH1P40925 Y_RNA.476-201ENST00000384347 108 ntBASIC0.01□□□□□ -2.41
MDH1P40925 MIR1302-11-201ENST00000408051 138 ntBASIC0.01□□□□□ -2.41
MDH1P40925 MIR1302-9-201ENST00000408365 138 ntBASIC0.01□□□□□ -2.41
MDH1P40925 MIR1302-10-201ENST00000408734 138 ntBASIC0.01□□□□□ -2.41
MDH1P40925 RNU2-11P-201ENST00000459191 187 ntBASIC0.01□□□□□ -2.41
MDH1P40925 FGF7P4-201ENST00000509595 295 ntBASIC0.01□□□□□ -2.41
MDH1P40925 RNU6-504P-201ENST00000516568 104 ntBASIC0.01□□□□□ -2.41
MDH1P40925 SNORD36C-201ENST00000516733 66 ntBASIC0.01□□□□□ -2.41
MDH1P40925 RNU2-31P-201ENST00000516954 155 ntBASIC0.01□□□□□ -2.41
MDH1P40925 MIR1302-2-201ENST00000607096 138 ntBASIC0.01□□□□□ -2.41
MDH1P40925 MIR30D-201ENST00000362283 70 ntBASIC0□□□□□ -2.41
MDH1P40925 Y_RNA.7-201ENST00000362352 102 ntBASIC0□□□□□ -2.41
MDH1P40925 SNORD12C-201ENST00000386307 89 ntBASIC0□□□□□ -2.41
MDH1P40925 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0□□□□□ -2.41
MDH1P40925 SNORA26-201ENST00000391286 122 ntBASIC0□□□□□ -2.41
MDH1P40925 RNA5SP261-201ENST00000410536 106 ntBASIC0□□□□□ -2.41
MDH1P40925 Y_RNA.637-201ENST00000459424 114 ntBASIC0□□□□□ -2.41
MDH1P40925 MIR1273G-201ENST00000577677 100 ntBASIC0□□□□□ -2.41
MDH1P40925 AC037487.3-201ENST00000606668 112 ntBASIC0□□□□□ -2.41
MDH1P40925 RNU6-888P-201ENST00000363010 101 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 RNU6-514P-201ENST00000384208 107 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 SNORD61-201ENST00000384252 73 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 RNU4-83P-201ENST00000410863 133 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 AL512326.2-201ENST00000426359 151 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 AL138752.1-201ENST00000452964 351 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 HSPE1P25-201ENST00000455484 251 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 MTCO2P24-201ENST00000515611 426 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 RNU6-998P-201ENST00000515894 101 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 AP003327.1-201ENST00000529684 127 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 AC112487.2-201ENST00000637950 304 ntBASIC-0.01□□□□□ -2.41
MDH1P40925 MIR302B-201ENST00000362188 73 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 SNORA42.1-201ENST00000363515 137 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 Y_RNA.505-201ENST00000384489 102 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 AL358176.2-201ENST00000425769 204 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 SEPT7P4-201ENST00000437076 306 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
MDH1P40925 MIR5688-201ENST00000580619 83 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 AC090574.1-201ENST00000623186 233 ntBASIC-0.02□□□□□ -2.41
MDH1P40925 MIR330-201ENST00000362196 94 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 SNORA9.1-201ENST00000362412 131 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 Y_RNA.410-201ENST00000383992 113 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 MIR548A2-201ENST00000384956 97 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 MIR526A2-201ENST00000390198 65 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 RNA5SP237-201ENST00000410414 113 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.03□□□□□ -2.41
MDH1P40925 RNA5SP268-201ENST00000516828 124 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 AP003733.2-201ENST00000529409 171 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 MIR7111-201ENST00000619751 72 ntBASIC-0.03□□□□□ -2.41
MDH1P40925 SNORA25.1-201ENST00000362326 128 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 RNA5SP214-201ENST00000363378 118 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 SNORA36.1-201ENST00000363424 132 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 RNU6-102P-201ENST00000384485 104 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 SNORD115-46-201ENST00000390982 71 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 SNORA53-201ENST00000391141 249 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.04□□□□□ -2.42
MDH1P40925 AC006006.1-201ENST00000603082 144 ntBASIC-0.04□□□□□ -2.42
MDH1P40925 MIR342-201ENST00000362212 99 ntBASIC-0.05□□□□□ -2.42
MDH1P40925 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.05□□□□□ -2.42
MDH1P40925 SNORD114-9-201ENST00000364370 72 ntBASIC-0.05□□□□□ -2.42
MDH1P40925 RNU6-1190P-201ENST00000410811 104 ntBASIC-0.05□□□□□ -2.42
MDH1P40925 PMCHL1-202ENST00000423102 261 ntBASIC-0.05□□□□□ -2.42
MDH1P40925 RBMX2P4-201ENST00000441256 376 ntBASIC-0.05□□□□□ -2.42
MDH1P40925 RNA5SP227-201ENST00000516184 113 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms