Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 Y_RNA.486-201ENST00000384398 107 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 MIR548A2-201ENST00000384956 97 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 MIR501-201ENST00000390204 84 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 PDCL2P1-201ENST00000419302 352 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 RNU7-96P-201ENST00000459535 64 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 MTND4P17-201ENST00000470444 350 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 RNU6-998P-201ENST00000515894 101 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 AC124312.5-201ENST00000604451 268 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 AL021707.8-201ENST00000609428 183 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-0.5□□□□□ -2.49
RPA3P35244 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 RNU6-370P-201ENST00000411008 104 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 RNU7-45P-201ENST00000459460 63 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 RNU2-31P-201ENST00000516954 155 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 AC024909.2-201ENST00000553035 286 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-0.51□□□□□ -2.49
RPA3P35244 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 MIR6717-201ENST00000622747 73 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 MIR6759-201ENST00000638110 65 ntBASIC-0.51□□□□□ -2.49
RPA3P35244 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
RPA3P35244 MIR342-201ENST00000362212 99 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 SNORA18.1-201ENST00000363418 128 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 SNORA26.6-201ENST00000391256 115 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 RNU6-320P-201ENST00000516511 106 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 AL670379.3-201ENST00000605040 251 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 Y_RNA.772-201ENST00000606692 102 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 AC010205.1-201ENST00000616668 449 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 AC048344.4-201ENST00000619744 527 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 AC099654.14-201ENST00000638599 341 ntBASIC-0.52□□□□□ -2.49
RPA3P35244 RNU6-1205P-201ENST00000363625 106 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 RNU6-899P-201ENST00000363947 107 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 Y_RNA.383-201ENST00000383855 97 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 SNORD61-201ENST00000384252 73 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 AC096949.1-201ENST00000412047 152 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 AL160004.2-201ENST00000432935 350 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC-0.53□□□□□ -2.49
RPA3P35244 RNU7-30P-201ENST00000516835 62 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 RNU6-1270P-201ENST00000517128 108 ntBASIC-0.53□□□□□ -2.49
RPA3P35244 RNU6-21P-201ENST00000384710 107 ntBASIC-0.54□□□□□ -2.5
RPA3P35244 SNORD77.4-201ENST00000516158 81 ntBASIC-0.54□□□□□ -2.5
RPA3P35244 AC026407.1-201ENST00000518369 204 ntBASIC-0.54□□□□□ -2.5
RPA3P35244 VN1R91P-201ENST00000594377 169 ntBASIC-0.54□□□□□ -2.5
RPA3P35244 RNU6-653P-201ENST00000363074 106 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 RNU6-144P-201ENST00000383951 107 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 RNU6-937P-201ENST00000384325 106 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 MIR106A-201ENST00000384870 81 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 RNU6-180P-201ENST00000516697 61 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 SNORA25.16-201ENST00000516741 121 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 IGLVI-20-201ENST00000519296 130 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 AC141846.1-201ENST00000568348 142 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 MIR548AD-201ENST00000584780 82 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 SNORA70.25-201ENST00000612741 95 ntBASIC-0.55□□□□□ -2.5
RPA3P35244 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.56□□□□□ -2.5
RPA3P35244 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 SNORD114-31-201ENST00000363219 75 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 Y_RNA.813-201ENST00000364639 102 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 SNORD24-201ENST00000383884 75 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 RNU6-1248P-201ENST00000391096 64 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 AF228730.3-201ENST00000436691 102 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 AC100767.1-201ENST00000528178 123 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 MIR4662B-201ENST00000579498 81 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 MIR5690-201ENST00000583739 73 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 AL442067.1-201ENST00000613261 223 ntBASIC-0.56□□□□□ -2.5
RPA3P35244 MIR302B-201ENST00000362188 73 ntBASIC-0.57□□□□□ -2.5
RPA3P35244 RNA5SP245-201ENST00000364239 121 ntBASIC-0.57□□□□□ -2.5
RPA3P35244 Y_RNA.458-201ENST00000384240 102 ntBASIC-0.57□□□□□ -2.5
RPA3P35244 RNU6-763P-201ENST00000390865 106 ntBASIC-0.57□□□□□ -2.5
RPA3P35244 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.57□□□□□ -2.5
RPA3P35244 RNU6-475P-201ENST00000516073 104 ntBASIC-0.57□□□□□ -2.5
RPA3P35244 RNU6-888P-201ENST00000363010 101 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 RNA5SP275-201ENST00000363936 118 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 Y_RNA.286-201ENST00000364813 102 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 RNY3-201ENST00000365484 102 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 SNORD116-2-201ENST00000384274 95 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 SNORD116-6-201ENST00000384711 96 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 AC099799.1-201ENST00000439809 192 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 RNU6-191P-201ENST00000516295 94 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 RNU2-60P-201ENST00000517290 128 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 MIR3925-201ENST00000584674 77 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 AC092447.9-201ENST00000603395 144 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 U4.5-201ENST00000617137 123 ntBASIC-0.58□□□□□ -2.5
RPA3P35244 RNU6-46P-201ENST00000383860 107 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 MIR559-201ENST00000385188 96 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 RNU6-365P-201ENST00000517113 106 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 MIR5706-201ENST00000579841 80 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 MIR6514-201ENST00000622549 70 ntBASIC-0.59□□□□□ -2.5
RPA3P35244 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.6□□□□□ -2.51
RPA3P35244 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.6□□□□□ -2.51
RPA3P35244 RNU6-726P-201ENST00000364680 107 ntBASIC-0.6□□□□□ -2.51
RPA3P35244 SNORD63-201ENST00000384262 68 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms