Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MIR3683-201ENST00000580847 82 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.81□□□□□ -2.12
SLC6A4P31645 MTND5P32-201ENST00000560711 1802 ntBASIC1.81□□□□□ -2.12
SLC6A4P31645 RNY1P11-201ENST00000363759 113 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 RNU6-457P-201ENST00000363999 107 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 Y_RNA.241-201ENST00000364470 117 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 SNORA70.7-201ENST00000384159 133 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 RNU6-439P-201ENST00000384188 106 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 MIR526A1-201ENST00000384897 85 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 MIR653-201ENST00000385279 96 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 RNU6-321P-201ENST00000410912 106 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 RNA5SP236-201ENST00000516169 116 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 RNU6-62P-201ENST00000516526 102 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 SUMO2P16-201ENST00000519475 264 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 AC090049.2-201ENST00000550377 109 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 FAM106DP-201ENST00000586416 501 ntBASIC1.8□□□□□ -2.12
SLC6A4P31645 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SLC6A4P31645 ICE2P2-201ENST00000483823 2787 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 SNORA27-201ENST00000384323 126 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 MIR30A-201ENST00000385092 71 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 AL606753.1-201ENST00000427435 87 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.79□□□□□ -2.12
SLC6A4P31645 SNORD123-201ENST00000459473 70 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 RNU7-96P-201ENST00000459535 64 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 SNORA25.15-201ENST00000516487 89 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 Y_RNA.686-201ENST00000516548 134 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 RNU2-60P-201ENST00000517290 128 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 SNORA77B-201ENST00000578179 125 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 AC103810.8-201ENST00000607347 118 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 AC095038.3-201ENST00000634439 195 ntBASIC1.79□□□□□ -2.12
SLC6A4P31645 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SLC6A4P31645 SNORD33-201ENST00000362761 85 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 RNA5SP190-201ENST00000365222 118 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 RNA5SP259-201ENST00000365541 109 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 Y_RNA.370-201ENST00000365589 108 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 RNU6-80P-201ENST00000384195 107 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 MIR499A-201ENST00000384903 122 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 SNORA17.3-201ENST00000391159 129 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 AL451046.2-201ENST00000403074 277 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 AC008267.6-201ENST00000441664 139 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 RNU6-1211P-201ENST00000459179 105 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 RNU7-43P-201ENST00000516554 64 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 AC015688.6-201ENST00000577737 104 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 MIR3198-2-201ENST00000577868 80 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 MIR3121-201ENST00000579680 77 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
SLC6A4P31645 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.77□□□□□ -2.13
SLC6A4P31645 RNU6-647P-201ENST00000364243 107 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 Y_RNA.508-201ENST00000384502 114 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RNU6-1081P-201ENST00000384537 107 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 SNORA67.5-201ENST00000391036 107 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 snoU13.9-201ENST00000458927 103 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 SNORD13-201ENST00000459299 104 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RPS29P24-201ENST00000486345 171 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RPS26P48-201ENST00000491713 339 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RN7SKP179-201ENST00000516126 217 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RNU6-971P-201ENST00000516920 106 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RNU7-181P-201ENST00000517234 74 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 AC090821.2-201ENST00000523552 176 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.77□□□□□ -2.13
SLC6A4P31645 AL513534.2-201ENST00000603836 250 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 MIR376A2-201ENST00000636782 80 ntBASIC1.77□□□□□ -2.13
SLC6A4P31645 RNU1-133P-201ENST00000364867 167 ntBASIC1.76□□□□□ -2.13
SLC6A4P31645 Y_RNA.351-201ENST00000365436 96 ntBASIC1.76□□□□□ -2.13
SLC6A4P31645 RNU6-917P-201ENST00000516294 104 ntBASIC1.76□□□□□ -2.13
SLC6A4P31645 AL359821.1-201ENST00000605519 182 ntBASIC1.76□□□□□ -2.13
SLC6A4P31645 AL022345.2-201ENST00000606307 135 ntBASIC1.76□□□□□ -2.13
SLC6A4P31645 AC106754.2-201ENST00000623006 233 ntBASIC1.76□□□□□ -2.13
SLC6A4P31645 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
SLC6A4P31645 Y_RNA.118-201ENST00000363300 101 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 RNU6-22P-201ENST00000384355 107 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 Y_RNA.537-201ENST00000384626 109 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 MIR548I2-201ENST00000408348 149 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 BTF3P4-201ENST00000418852 495 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 AL035398.1-201ENST00000430869 322 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 RNU6-998P-201ENST00000515894 101 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 RNU6-479P-201ENST00000516348 105 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 RNU7-53P-201ENST00000516705 60 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 MIR4255-201ENST00000579351 72 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 AL357312.1-201ENST00000603879 298 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 AC012493.3-201ENST00000604494 112 ntBASIC1.75□□□□□ -2.13
SLC6A4P31645 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.75□□□□□ -2.13
SLC6A4P31645 Y_RNA.114-201ENST00000363265 113 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 Y_RNA.280-201ENST00000364765 112 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 SNORA25.9-201ENST00000365087 128 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 SNORD116-14-201ENST00000383894 92 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 SNORD116-17-201ENST00000383929 92 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 SNORD116-15-201ENST00000384445 92 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 SNORD116-19-201ENST00000384729 92 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 AL158147.1-201ENST00000443970 75 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 TRMT112P2-201ENST00000512910 132 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 RNU2-13P-201ENST00000515909 113 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 MIR548AI-201ENST00000579940 88 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 MIR548AR-201ENST00000582191 57 ntBASIC1.74□□□□□ -2.13
SLC6A4P31645 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SLC6A4P31645 MIR302B-201ENST00000362188 73 ntBASIC1.73□□□□□ -2.13
SLC6A4P31645 RNU6-309P-201ENST00000364573 106 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms