Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MT-TT-201ENST00000387460 66 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 AC244023.1-201ENST00000426884 112 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 SNORD2.1-201ENST00000458762 69 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 snoU13.21-201ENST00000459368 105 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 AC113410.1-201ENST00000505029 247 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 SCARNA8-201ENST00000515924 131 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 RNU6-693P-201ENST00000516134 107 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 SNORA18.4-201ENST00000516440 124 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 RNU6-635P-201ENST00000516651 102 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 MIR2115-201ENST00000516657 100 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 AC100767.1-201ENST00000528178 123 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 AC242498.1-201ENST00000604134 111 ntBASIC0.55□□□□□ -2.32
HOXA9P31269 Y_RNA.66-201ENST00000362862 102 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 Y_RNA.168-201ENST00000363740 102 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 snoU2_19.4-201ENST00000364329 80 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 Y_RNA.241-201ENST00000364470 117 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.54□□□□□ -2.32
HOXA9P31269 SNRPGP8-201ENST00000454064 226 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.54□□□□□ -2.32
HOXA9P31269 RNU6-1110P-201ENST00000516462 101 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 RNU6-453P-201ENST00000516819 85 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 Y_RNA.720-201ENST00000517166 92 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 MIR4643-201ENST00000577473 78 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 MIR4662B-201ENST00000579498 81 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 7SK.10-201ENST00000621414 298 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 MIR8062-201ENST00000621515 85 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 MIR5087-201ENST00000635826 76 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
HOXA9P31269 SNORD115-34-201ENST00000362441 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-12-201ENST00000362583 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-29-201ENST00000362834 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-9-201ENST00000362912 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-21-201ENST00000362963 81 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.82-201ENST00000363000 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-888P-201ENST00000363010 101 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.92-201ENST00000363043 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-14-201ENST00000363090 81 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-13-201ENST00000363358 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-41-201ENST00000363608 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-11-201ENST00000363616 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-5-201ENST00000363633 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-39-201ENST00000363694 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-4-201ENST00000363810 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-16-201ENST00000363887 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-6-201ENST00000363942 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-42-201ENST00000364273 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.235-201ENST00000364412 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORA63C-201ENST00000364578 129 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-15-201ENST00000364809 81 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-1-201ENST00000364961 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.306-201ENST00000365015 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-26-201ENST00000365067 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-10-201ENST00000365073 81 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.312-201ENST00000365089 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.322-201ENST00000365151 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-43-201ENST00000365503 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-36-201ENST00000365629 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD24-201ENST00000383884 75 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-484P-201ENST00000384016 107 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.422-201ENST00000384054 114 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-472P-201ENST00000384299 107 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-1160P-201ENST00000384546 104 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-205P-201ENST00000390858 107 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-913P-201ENST00000390913 95 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORA40.5-201ENST00000391061 128 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 MIR548F4-201ENST00000408515 105 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD99-201ENST00000408612 74 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 AC087499.4-201ENST00000448505 178 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.650-201ENST00000459002 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 snoU13.16-201ENST00000459350 104 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 COX6CP6-201ENST00000490840 228 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD36C-201ENST00000516733 66 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.777-201ENST00000516982 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 RNU6-958P-201ENST00000516995 106 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.771-201ENST00000598668 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 AP000942.4-201ENST00000604811 241 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 SNORD115-40-201ENST00000606510 82 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 MIR8055-201ENST00000610739 97 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 Y_RNA.789-201ENST00000622480 102 ntBASIC0.53□□□□□ -2.32
HOXA9P31269 MIR335-201ENST00000362173 94 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 Y_RNA.91-201ENST00000363042 107 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 RNA5SP457-201ENST00000363657 124 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 MT-TN-201ENST00000387400 73 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 MIR1827-201ENST00000408549 66 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 AF228730.3-201ENST00000436691 102 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 RNU7-67P-201ENST00000459003 62 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 AC107297.1-201ENST00000459991 176 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 RNU6-365P-201ENST00000517113 106 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 RNU6-1270P-201ENST00000517128 108 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 MIR4282-201ENST00000583613 67 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 U2.14-201ENST00000615943 113 ntBASIC0.52□□□□□ -2.33
HOXA9P31269 MIR377-201ENST00000362145 69 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 MIR330-201ENST00000362196 94 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 Y_RNA.634-201ENST00000364811 113 ntBASIC0.51□□□□□ -2.33
HOXA9P31269 Y_RNA.518-201ENST00000384552 113 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms