Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AC012433.1-201ENST00000588916 398 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 AC104465.1-201ENST00000611365 139 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 7SK.10-201ENST00000621414 298 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 U6.104-201ENST00000637979 90 ntBASIC0.75□□□□□ -2.29
PDGFRAP16234 MIR377-201ENST00000362145 69 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-34-201ENST00000362441 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-12-201ENST00000362583 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-29-201ENST00000362834 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-9-201ENST00000362912 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-21-201ENST00000362963 81 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-14-201ENST00000363090 81 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-13-201ENST00000363358 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 Y_RNA.149-201ENST00000363558 117 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-41-201ENST00000363608 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-11-201ENST00000363616 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-5-201ENST00000363633 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-39-201ENST00000363694 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-4-201ENST00000363810 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-16-201ENST00000363887 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-28-201ENST00000363931 81 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-6-201ENST00000363942 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-42-201ENST00000364273 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-15-201ENST00000364809 81 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-1-201ENST00000364961 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 Y_RNA.304-201ENST00000365011 112 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-26-201ENST00000365067 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-10-201ENST00000365073 81 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 Y_RNA.354-201ENST00000365448 111 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-43-201ENST00000365503 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-36-201ENST00000365629 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 MIR1827-201ENST00000408549 66 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD99-201ENST00000408612 74 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 RNA5SP95-201ENST00000410319 137 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 RNU6-938P-201ENST00000411285 103 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 AC087499.4-201ENST00000448505 178 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.74□□□□□ -2.29
PDGFRAP16234 snoU13.16-201ENST00000459350 104 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SCARNA15.1-201ENST00000516384 125 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 RNU6-126P-201ENST00000516685 103 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 RNU6-453P-201ENST00000516819 85 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 RNU6-1270P-201ENST00000517128 108 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 SNORD115-40-201ENST00000606510 82 ntBASIC0.74□□□□□ -2.29
PDGFRAP16234 Y_RNA.66-201ENST00000362862 102 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 Y_RNA.91-201ENST00000363042 107 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 RNU6-653P-201ENST00000363074 106 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 Y_RNA.241-201ENST00000364470 117 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 Y_RNA.352-201ENST00000365439 102 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 SNORD24-201ENST00000383884 75 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 SNORD61-201ENST00000384252 73 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 RPS26P5-201ENST00000418544 335 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 RNU6-693P-201ENST00000516134 107 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 MIR5000-201ENST00000577717 103 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 AC011921.3-201ENST00000605540 361 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 AL365265.1-201ENST00000621045 234 ntBASIC0.73□□□□□ -2.29
PDGFRAP16234 MIR1-1-201ENST00000362147 71 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 Y_RNA.37-201ENST00000362606 108 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 Y_RNA.76-201ENST00000362931 109 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 RNU6-888P-201ENST00000363010 101 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 Y_RNA.133-201ENST00000363428 110 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 Y_RNA.277-201ENST00000364754 102 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 MIR568-201ENST00000385036 95 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 MIR616-201ENST00000385293 97 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 RNU6-381P-201ENST00000391259 108 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 MTND2P23-201ENST00000422990 651 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 RNU6-327P-201ENST00000516270 127 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 Y_RNA.679-201ENST00000516416 91 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 SNORA18.4-201ENST00000516440 124 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 AP000753.3-201ENST00000604083 169 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 MIR6515-201ENST00000619843 57 ntBASIC0.72□□□□□ -2.29
PDGFRAP16234 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.71□□□□□ -2.3
PDGFRAP16234 Y_RNA.54-201ENST00000362766 105 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 Y_RNA.634-201ENST00000364811 113 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 Y_RNA.416-201ENST00000384014 113 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 AL606845.1-201ENST00000404881 255 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 Y_RNA.622-201ENST00000411091 108 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 MTCYBP9-201ENST00000431021 303 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 MTND5P15-201ENST00000434246 349 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 SNORD127-201ENST00000458892 86 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 COX6CP6-201ENST00000490840 228 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 RNU6-1299P-201ENST00000516316 100 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 SNORD36C-201ENST00000516733 66 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 RNU6-365P-201ENST00000517113 106 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 AP000942.4-201ENST00000604811 241 ntBASIC0.71□□□□□ -2.3
PDGFRAP16234 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
PDGFRAP16234 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
PDGFRAP16234 RNY1-201ENST00000364228 113 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
PDGFRAP16234 Y_RNA.432-201ENST00000384087 111 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 RNY3P5-201ENST00000384127 102 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 RNU6-125P-201ENST00000384505 107 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 Y_RNA.562-201ENST00000384695 113 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 SNORA40.5-201ENST00000391061 128 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 RNU2-55P-201ENST00000411146 174 ntBASIC0.7□□□□□ -2.3
PDGFRAP16234 AC090844.1-201ENST00000422019 156 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms