Protein–RNA interactions for Protein: P12109

COL6A1, Collagen alpha-1(VI) chain, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1P12109 RNY1P6-201ENST00000384193 109 ntBASIC2.24□□□□□ -2.05
COL6A1P12109 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.24□□□□□ -2.05
COL6A1P12109 AL031737.1-201ENST00000450125 223 ntBASIC2.24□□□□□ -2.05
COL6A1P12109 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
COL6A1P12109 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
COL6A1P12109 AC005336.3-201ENST00000623833 2679 ntBASIC2.24□□□□□ -2.05
COL6A1P12109 Y_RNA.198-201ENST00000364013 98 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 Y_RNA.281-201ENST00000364774 94 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 Y_RNA.309-201ENST00000365046 111 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 Y_RNA.351-201ENST00000365436 96 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 MIR489-201ENST00000384923 84 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.23□□□□□ -2.05
COL6A1P12109 RPL23AP63-201ENST00000498752 471 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 SNORA31.10-201ENST00000516482 106 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 MIR4448-201ENST00000584360 86 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 AC002984.1-201ENST00000591692 448 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 AC021443.1-201ENST00000604478 211 ntBASIC2.23□□□□□ -2.05
COL6A1P12109 MIRLET7C-201ENST00000362160 84 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 RNU6-349P-201ENST00000362402 107 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 Y_RNA.116-201ENST00000363292 103 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 SNORA63D-201ENST00000364359 132 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 RNA5SP190-201ENST00000365222 118 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 U8.17-201ENST00000391292 132 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 RNU6-938P-201ENST00000411285 103 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 AP1B1P2-201ENST00000416196 106 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 AC245517.4-201ENST00000448601 281 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 SNORD13-201ENST00000459299 104 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 RNU6-1116P-201ENST00000517269 99 ntBASIC2.22□□□□□ -2.05
COL6A1P12109 RNU6-833P-201ENST00000363486 107 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 RNY4P6-201ENST00000363667 96 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 MIR520A-201ENST00000384862 85 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 SNORD12C-201ENST00000386307 89 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 RNU2-7P-201ENST00000410794 178 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 RNU6-830P-201ENST00000516353 107 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 RNY4P20-201ENST00000516678 93 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 RNA5SP170-201ENST00000517150 101 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.21□□□□□ -2.06
COL6A1P12109 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.21□□□□□ -2.06
COL6A1P12109 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
COL6A1P12109 AL596211.1-201ENST00000569873 2277 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL6A1P12109 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.2□□□□□ -2.06
COL6A1P12109 Y_RNA.241-201ENST00000364470 117 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 RNU6-1107P-201ENST00000364817 104 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 RNU6-32P-201ENST00000383948 107 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 RNU6-13P-201ENST00000384248 107 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 RNU6-12P-201ENST00000384604 107 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 RNU6-41P-201ENST00000384741 107 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 AC015922.2-201ENST00000435593 184 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 HSPE1P9-201ENST00000440046 311 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 TRMT112P2-201ENST00000512910 132 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 RNU6-168P-201ENST00000516189 101 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 uc_338.28-201ENST00000612082 187 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 AC091932.4-201ENST00000623386 200 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 AP000553.5-201ENST00000641933 54 ntBASIC2.2□□□□□ -2.06
COL6A1P12109 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
COL6A1P12109 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
COL6A1P12109 AL589743.1-201ENST00000551932 2712 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 MIRLET7G-201ENST00000362280 84 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 Y_RNA.49-201ENST00000362714 112 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 Y_RNA.85-201ENST00000363014 111 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 SNORA25.9-201ENST00000365087 128 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 SNORA27-201ENST00000384323 126 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 MIR518E-201ENST00000385252 88 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 U8.16-201ENST00000391279 133 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 RNU4-62P-201ENST00000410125 130 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 RNA5SP89-201ENST00000410300 108 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 AL445685.2-201ENST00000422551 342 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 AL035398.1-201ENST00000430869 322 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 RNU7-164P-201ENST00000459221 62 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 RNU7-12P-201ENST00000516030 62 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 RNA5SP168-201ENST00000516642 112 ntBASIC2.19□□□□□ -2.06
COL6A1P12109 SNORD115-34-201ENST00000362441 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-12-201ENST00000362583 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 Y_RNA.43-201ENST00000362670 111 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-29-201ENST00000362834 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-9-201ENST00000362912 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-21-201ENST00000362963 81 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-14-201ENST00000363090 81 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-13-201ENST00000363358 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-41-201ENST00000363608 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-11-201ENST00000363616 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-5-201ENST00000363633 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-39-201ENST00000363694 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-4-201ENST00000363810 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-16-201ENST00000363887 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-6-201ENST00000363942 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-42-201ENST00000364273 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-15-201ENST00000364809 81 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 Y_RNA.298-201ENST00000364960 107 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-1-201ENST00000364961 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-26-201ENST00000365067 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-10-201ENST00000365073 81 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-43-201ENST00000365503 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 SNORD115-36-201ENST00000365629 82 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 Y_RNA.466-201ENST00000384294 113 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 RNU6-1031P-201ENST00000384773 107 ntBASIC2.18□□□□□ -2.06
COL6A1P12109 MIR452-201ENST00000385020 85 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms