Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 RNA5SP517-201ENST00000364724 117 ntBASIC0.05□□□□□ -2.4
COL4A2P08572 RNU2-59P-201ENST00000410482 191 ntBASIC0.05□□□□□ -2.4
COL4A2P08572 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A2P08572 HMGN2P22-201ENST00000427588 175 ntBASIC0.05□□□□□ -2.4
COL4A2P08572 MTCO1P5-201ENST00000433573 344 ntBASIC0.05□□□□□ -2.4
COL4A2P08572 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.05□□□□□ -2.4
COL4A2P08572 MIR4423-201ENST00000580922 80 ntBASIC0.05□□□□□ -2.4
COL4A2P08572 Z97988.1-201ENST00000637697 135 ntBASIC0.05□□□□□ -2.4
COL4A2P08572 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU6-1309P-201ENST00000363305 108 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 Y_RNA.259-201ENST00000364619 101 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU6-1040P-201ENST00000383974 107 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 SNORA72.4-201ENST00000384174 132 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 Y_RNA.463-201ENST00000384271 102 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 SNORA27-201ENST00000384323 126 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 Y_RNA.474-201ENST00000384341 102 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 Y_RNA.551-201ENST00000384661 102 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 MIR559-201ENST00000385188 96 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU6-383P-201ENST00000410864 94 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.04□□□□□ -2.4
COL4A2P08572 AC015818.7-201ENST00000428754 109 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC087499.7-201ENST00000441958 109 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 Y_RNA.666-201ENST00000516187 112 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 MIR4645-201ENST00000583158 77 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC092447.9-201ENST00000603395 144 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 U6atac.1-201ENST00000616025 117 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AL606534.2-204ENST00000635008 178 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 MTND4LP32-201ENST00000636111 270 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 Y_RNA.35-201ENST00000362601 101 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU6-937P-201ENST00000384325 106 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNA5SP496-201ENST00000391240 109 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC138393.2-201ENST00000414742 246 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC098614.3-201ENST00000438957 440 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU2-11P-201ENST00000459191 187 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 SNORD116.3-201ENST00000517176 78 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC141557.1-201ENST00000540982 400 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 MIR5688-201ENST00000580619 83 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC008608.1-201ENST00000603910 127 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 AC013791.1-201ENST00000616619 62 ntBASIC0.04□□□□□ -2.4
COL4A2P08572 RNU6-1138P-201ENST00000365359 106 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 SNORD116-29-201ENST00000384516 83 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 AC073261.1-201ENST00000429409 121 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 RNU7-25P-201ENST00000516544 62 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 RNU6-126P-201ENST00000516685 103 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 RNU6-365P-201ENST00000517113 106 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 AC007751.1-201ENST00000529260 376 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 Y_RNA.757-201ENST00000578934 114 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 DEFB117-201ENST00000602356 141 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 AC006157.1-201ENST00000611750 366 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 AC099654.14-201ENST00000638599 341 ntBASIC0.03□□□□□ -2.4
COL4A2P08572 Y_RNA.14-201ENST00000362415 103 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 Y_RNA.37-201ENST00000362606 108 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 SNORA1.1-201ENST00000364671 133 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 RNU6-740P-201ENST00000364734 105 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 RNU6-815P-201ENST00000384080 113 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 MIR563-201ENST00000385080 79 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 AL160004.2-201ENST00000432935 350 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 RNU7-152P-201ENST00000458982 64 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 AP000942.4-201ENST00000604811 241 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 MIR6740-201ENST00000618268 113 ntBASIC0.02□□□□□ -2.41
COL4A2P08572 Y_RNA.39-201ENST00000362620 98 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 RNU6-1205P-201ENST00000363625 106 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 Y_RNA.424-201ENST00000384063 103 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MT-TF-201ENST00000387314 71 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 SNORA26.5-201ENST00000391215 123 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 SNORD93-201ENST00000408813 74 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MRPS35P2-201ENST00000508242 191 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 SNORA18.4-201ENST00000516440 124 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 RNU6-504P-201ENST00000516568 104 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AC112693.2-201ENST00000556538 232 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MIR4724-201ENST00000579485 89 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MIR3152-201ENST00000579801 74 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MIR4431-201ENST00000579990 94 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AL049861.1-201ENST00000603130 150 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 SNORD58B-201ENST00000607313 66 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AC139792.2-201ENST00000624218 587 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MIR4272-201ENST00000635924 64 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MIR302B-201ENST00000362188 73 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 Y_RNA.526-201ENST00000384572 110 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MIR588-201ENST00000384900 83 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 MT-TQ-201ENST00000387372 72 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 SNORD77.3-201ENST00000391113 65 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 RNU6-1165P-201ENST00000410119 107 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 RPL39P25-201ENST00000449384 154 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AC010655.3-201ENST00000478818 450 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AC091959.1-201ENST00000495857 238 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AC005357.1-201ENST00000588399 301 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 AC122108.2-201ENST00000611946 526 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.01□□□□□ -2.41
COL4A2P08572 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
COL4A2P08572 MIR342-201ENST00000362212 99 ntBASIC0□□□□□ -2.41
COL4A2P08572 Y_RNA.351-201ENST00000365436 96 ntBASIC0□□□□□ -2.41
COL4A2P08572 SNORA8.2-201ENST00000384372 139 ntBASIC0□□□□□ -2.41
COL4A2P08572 Y_RNA.486-201ENST00000384398 107 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 211.6 ms