Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU6-1270P-201ENST00000517128 108 ntBASIC0.56□□□□□ -2.32
SFTPBP07988 AC004812.1-201ENST00000540773 146 ntBASIC0.56□□□□□ -2.32
SFTPBP07988 MIR4771-2-201ENST00000577758 74 ntBASIC0.56□□□□□ -2.32
SFTPBP07988 MIR4771-1-201ENST00000582617 74 ntBASIC0.56□□□□□ -2.32
SFTPBP07988 AC242498.1-201ENST00000604134 111 ntBASIC0.56□□□□□ -2.32
SFTPBP07988 AP000942.4-201ENST00000604811 241 ntBASIC0.56□□□□□ -2.32
SFTPBP07988 Y_RNA.24-201ENST00000362508 103 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 Y_RNA.37-201ENST00000362606 108 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 Y_RNA.152-201ENST00000363578 100 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 MIR520F-201ENST00000384824 87 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 MIR548A2-201ENST00000384956 97 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 MIR520H-201ENST00000385126 88 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 RNU6-913P-201ENST00000390913 95 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 AC087499.4-201ENST00000448505 178 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 SERF1AP1-201ENST00000514575 187 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 RNU6-977P-201ENST00000516411 103 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 AC100767.1-201ENST00000528178 123 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 uc_338.6-201ENST00000613544 171 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
SFTPBP07988 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
SFTPBP07988 RNU6-211P-201ENST00000384047 107 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 SNORD61-201ENST00000384252 73 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 AL731563.1-201ENST00000442202 214 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 RNU7-62P-201ENST00000458856 62 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 RNU6-1143P-201ENST00000516125 104 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 SNORD36C-201ENST00000516733 66 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 RNU6-570P-201ENST00000517051 105 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 AC004817.2-201ENST00000561794 651 ntBASIC0.54□□□□□ -2.32
SFTPBP07988 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
SFTPBP07988 UBE2WP1-201ENST00000362030 340 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 Y_RNA.117-201ENST00000363294 101 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 Y_RNA.229-201ENST00000364347 113 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 SNORA27-201ENST00000384323 126 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 RNU6-1289P-201ENST00000384431 106 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 MIR573-201ENST00000384964 99 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 SNORA40.5-201ENST00000391061 128 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 HMGN1P33-201ENST00000432945 451 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 RNU6-1338P-201ENST00000516328 91 ntBASIC0.53□□□□□ -2.32
SFTPBP07988 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SFTPBP07988 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.52□□□□□ -2.33
SFTPBP07988 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
SFTPBP07988 SNORD24-201ENST00000383884 75 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 SNORA8.3-201ENST00000384679 139 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 MIR92A1-201ENST00000385233 78 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 RNU7-73P-201ENST00000458743 63 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 RNA5SP121-201ENST00000516537 101 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 RNU6-365P-201ENST00000517113 106 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 MIR924-201ENST00000638017 53 ntBASIC0.52□□□□□ -2.33
SFTPBP07988 Y_RNA.275-201ENST00000364726 110 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 RNU6-1203P-201ENST00000410703 110 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 AL138752.1-201ENST00000452964 351 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 RPS29P24-201ENST00000486345 171 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 MIR4676-201ENST00000583078 72 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 AL356055.1-201ENST00000602528 446 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 AC020891.4-201ENST00000605745 93 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 MIR6740-201ENST00000618268 113 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 AC243829.3-201ENST00000622177 108 ntBASIC0.51□□□□□ -2.33
SFTPBP07988 AC010332.2-201ENST00000613083 1904 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 RNU6-888P-201ENST00000363010 101 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 Y_RNA.202-201ENST00000364083 110 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 SNORD38B-201ENST00000384690 67 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 MIR626-201ENST00000385032 94 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 RNU6-177P-201ENST00000411257 104 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 AC018659.1-201ENST00000551083 169 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 MIR5688-201ENST00000580619 83 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 MIR4804-201ENST00000581683 73 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 MIR8055-201ENST00000610739 97 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 uc_338.17-201ENST00000619633 179 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 SNORD38B-202ENST00000625943 69 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.5□□□□□ -2.33
SFTPBP07988 Z97988.1-201ENST00000637697 135 ntBASIC0.5□□□□□ -2.33
SFTPBP07988 AL589743.1-201ENST00000551932 2712 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.49□□□□□ -2.33
SFTPBP07988 Y_RNA.91-201ENST00000363042 107 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 MT-TT-201ENST00000387460 66 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 RNU6-1190P-201ENST00000410811 104 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 AC113618.1-201ENST00000416747 285 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 AF228730.3-201ENST00000436691 102 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 RNU6-126P-201ENST00000516685 103 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 RNU7-53P-201ENST00000516705 60 ntBASIC0.49□□□□□ -2.33
SFTPBP07988 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.49□□□□□ -2.33
SFTPBP07988 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.49□□□□□ -2.33
SFTPBP07988 Y_RNA.66-201ENST00000362862 102 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 RNU6-797P-201ENST00000363101 109 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 RNU6-1309P-201ENST00000363305 108 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 SNORA1.1-201ENST00000364671 133 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 SNORA33.2-201ENST00000365413 134 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 RNU6-985P-201ENST00000410182 104 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 Y_RNA.622-201ENST00000411091 108 ntBASIC0.48□□□□□ -2.33
SFTPBP07988 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.48□□□□□ -2.33
SFTPBP07988 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.48□□□□□ -2.33
SFTPBP07988 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 278.9 ms