Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 SNORD24-201ENST00000383884 75 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 MIR1302-11-201ENST00000408051 138 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 MIR1302-9-201ENST00000408365 138 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 MIR548I3-201ENST00000408378 149 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 MIR1302-10-201ENST00000408734 138 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 RNU2-11P-201ENST00000459191 187 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 RNU6-397P-201ENST00000516226 104 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 AC100767.1-201ENST00000528178 123 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 MIR1302-2-201ENST00000607096 138 ntBASIC0.03□□□□□ -2.4
MT-ND4P03905 Y_RNA.7-201ENST00000362352 102 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 RNU4-90P-201ENST00000362773 141 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 RNU6-1272P-201ENST00000362776 107 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.58-201ENST00000362807 102 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 RNU6-888P-201ENST00000363010 101 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 SNORA72.1-201ENST00000363485 129 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.154-201ENST00000363624 102 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 RNY3P1-201ENST00000365085 102 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.445-201ENST00000384168 102 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.476-201ENST00000384347 108 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.529-201ENST00000384586 119 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 MIR644A-201ENST00000385262 94 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 SNORD115-46-201ENST00000390982 71 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 SNORD77.3-201ENST00000391113 65 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.617-201ENST00000410920 90 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 PMCHL1-202ENST00000423102 261 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.02□□□□□ -2.41
MT-ND4P03905 RNU6-998P-201ENST00000515894 101 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 RNU6-475P-201ENST00000516073 104 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
MT-ND4P03905 AC131281.1-201ENST00000522984 164 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 AC112693.2-201ENST00000556538 232 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 MIR8066-201ENST00000617280 78 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 MIR6515-201ENST00000619843 57 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.02□□□□□ -2.41
MT-ND4P03905 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.42-201ENST00000362660 108 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 RNU4-10P-201ENST00000364383 140 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 RNU6-1283P-201ENST00000365314 105 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 AF228730.3-201ENST00000436691 102 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 RNU7-96P-201ENST00000459535 64 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 RNU6-365P-201ENST00000517113 106 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 AP003327.1-201ENST00000529684 127 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.01□□□□□ -2.41
MT-ND4P03905 AC124312.5-201ENST00000604451 268 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 AC112487.2-201ENST00000637950 304 ntBASIC0.01□□□□□ -2.41
MT-ND4P03905 Y_RNA.183-201ENST00000363882 113 ntBASIC0□□□□□ -2.41
MT-ND4P03905 Y_RNA.197-201ENST00000364004 102 ntBASIC0□□□□□ -2.41
MT-ND4P03905 MIR518E-201ENST00000385252 88 ntBASIC0□□□□□ -2.41
MT-ND4P03905 Y_RNA.579-201ENST00000390939 94 ntBASIC0□□□□□ -2.41
MT-ND4P03905 SNORD93-201ENST00000408813 74 ntBASIC0□□□□□ -2.41
MT-ND4P03905 RNU2-59P-201ENST00000410482 191 ntBASIC0□□□□□ -2.41
MT-ND4P03905 RNU4-83P-201ENST00000410863 133 ntBASIC0□□□□□ -2.41
MT-ND4P03905 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0□□□□□ -2.41
MT-ND4P03905 Y_RNA.631-201ENST00000459607 101 ntBASIC0□□□□□ -2.41
MT-ND4P03905 RNU6-875P-201ENST00000516488 106 ntBASIC0□□□□□ -2.41
MT-ND4P03905 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0□□□□□ -2.41
MT-ND4P03905 AP001282.2-201ENST00000616149 309 ntBASIC0□□□□□ -2.41
MT-ND4P03905 IST1-227ENST00000626438 126 ntTSL 5 BASIC0□□□□□ -2.41
MT-ND4P03905 AC010487.4-201ENST00000637027 61 ntBASIC0□□□□□ -2.41
MT-ND4P03905 Y_RNA.66-201ENST00000362862 102 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 RNA5SP214-201ENST00000363378 118 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 SNORA42.1-201ENST00000363515 137 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 RNU6-662P-201ENST00000384253 104 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 SNORA26.6-201ENST00000391256 115 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 RNU6-504P-201ENST00000516568 104 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 RNA5SP268-201ENST00000516828 124 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 RNU6-897P-201ENST00000517135 105 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 MIR4768-201ENST00000585270 74 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 MIR6718-201ENST00000616153 80 ntBASIC-0.01□□□□□ -2.41
MT-ND4P03905 MIR342-201ENST00000362212 99 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.112-201ENST00000363250 102 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 SNORD114-9-201ENST00000364370 72 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.440-201ENST00000384120 114 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 MIR526A2-201ENST00000390198 65 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 RNU6-121P-201ENST00000410525 99 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 AL512326.2-201ENST00000426359 151 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 SEPT7P4-201ENST00000437076 306 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 AC069271.1-201ENST00000445577 156 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 RNU7-45P-201ENST00000459460 63 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 RNU6-507P-201ENST00000516045 100 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 RNU6-469P-201ENST00000516253 101 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 AL008718.3-201ENST00000610217 321 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 MIR6755-201ENST00000619993 66 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 uc_338.22-201ENST00000622722 187 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 MIR6717-201ENST00000622747 73 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 AC090574.1-201ENST00000623186 233 ntBASIC-0.02□□□□□ -2.41
MT-ND4P03905 RNU6-290P-201ENST00000365212 101 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 RNU6-597P-201ENST00000365620 102 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 RNU6-1189P-201ENST00000383958 107 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 MIR598-201ENST00000384868 97 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.03□□□□□ -2.41
MT-ND4P03905 snoU13.18-201ENST00000459483 104 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 1112.9 ms