Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL080274.1-201ENST00000605565 220 ntBASIC-1.27□□□□□ -2.61
APOC1P02654 uc_338.10-201ENST00000621872 182 ntBASIC-1.27□□□□□ -2.61
APOC1P02654 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 RNY1P2-201ENST00000364820 117 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 RNU6-900P-201ENST00000384498 102 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 RNU6-710P-201ENST00000410424 105 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 RNU7-141P-201ENST00000459304 62 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.28□□□□□ -2.61
APOC1P02654 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 AP000676.1-201ENST00000533307 52 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 MIR3915-201ENST00000578518 97 ntBASIC-1.28□□□□□ -2.61
APOC1P02654 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.28□□□□□ -2.61
APOC1P02654 MTND5P18-201ENST00000445624 1801 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 RNU6-626P-201ENST00000363354 107 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 SNORD114-29-201ENST00000364819 70 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 SNORD61-201ENST00000384252 73 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 RNU6-35P-201ENST00000384530 107 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 RNU6-1068P-201ENST00000410958 103 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 AF228730.3-201ENST00000436691 102 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.29□□□□□ -2.62
APOC1P02654 snoU13.13-201ENST00000458842 104 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 RNU6-232P-201ENST00000517144 64 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.29□□□□□ -2.62
APOC1P02654 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 AC040904.1-201ENST00000590850 223 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 DEFB117-201ENST00000602356 141 ntBASIC-1.29□□□□□ -2.62
APOC1P02654 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MT-TH-201ENST00000387441 69 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 SNORA26.8-201ENST00000391306 124 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MTND1P14-201ENST00000427400 950 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.3□□□□□ -2.62
APOC1P02654 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.3□□□□□ -2.62
APOC1P02654 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-1.3□□□□□ -2.62
APOC1P02654 MIR3179-1-201ENST00000578940 84 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MIR3179-2-201ENST00000579107 84 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MIR3179-3-201ENST00000579566 84 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 YWHAEP2-201ENST00000580066 112 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MIR3942-201ENST00000585264 109 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MIR3179-4-201ENST00000617599 84 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 AC079248.2-201ENST00000623779 326 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 MIR6841-201ENST00000637129 72 ntBASIC-1.3□□□□□ -2.62
APOC1P02654 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 MIR599-201ENST00000385069 95 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 MTND1P27-201ENST00000451117 902 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 SNORA27.4-201ENST00000516650 95 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 MIR4528-201ENST00000577763 90 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 AC011476.5-201ENST00000615594 130 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 AC107308.1-201ENST00000615897 301 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 U4.1-201ENST00000620349 87 ntBASIC-1.31□□□□□ -2.62
APOC1P02654 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 RNU6-154P-201ENST00000384306 106 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 TRAJ51-201ENST00000504127 63 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 MIR4499-201ENST00000584834 69 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 AL049861.1-201ENST00000603130 150 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 AL021707.8-201ENST00000609428 183 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 AC145423.2-201ENST00000610631 239 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.32□□□□□ -2.62
APOC1P02654 uc_338.19-201ENST00000616808 99 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 MIR376A2-201ENST00000636782 80 ntBASIC-1.32□□□□□ -2.62
APOC1P02654 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.32□□□□□ -2.62
APOC1P02654 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 RNU4-28P-201ENST00000364739 141 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 RNU6-449P-201ENST00000383914 107 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR517B-201ENST00000385102 67 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 AC074085.1-201ENST00000413598 418 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 SNORD5.1-201ENST00000458800 75 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 SCARNA17-201ENST00000516183 144 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR3145-201ENST00000580727 82 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR548AG2-201ENST00000581228 64 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR1244-1-201ENST00000612829 85 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 AC069503.3-201ENST00000618674 145 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR1244-3-201ENST00000635744 85 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR1244-2-201ENST00000636449 85 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR1244-4-202ENST00000636813 85 ntBASIC-1.33□□□□□ -2.62
APOC1P02654 MIR302B-201ENST00000362188 73 ntBASIC-1.34□□□□□ -2.62
APOC1P02654 SNORD81.1-201ENST00000363064 77 ntBASIC-1.34□□□□□ -2.62
APOC1P02654 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.34□□□□□ -2.62
APOC1P02654 AC093423.1-201ENST00000440817 142 ntBASIC-1.34□□□□□ -2.62
APOC1P02654 SNORD22.1-201ENST00000516331 125 ntBASIC-1.34□□□□□ -2.62
APOC1P02654 RNU4-80P-201ENST00000363200 141 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 RNA5SP261-201ENST00000410536 106 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.35□□□□□ -2.63
APOC1P02654 RNU7-79P-201ENST00000516082 62 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 MIR548H5-201ENST00000580314 60 ntBASIC-1.35□□□□□ -2.63
APOC1P02654 SNORA22.1-201ENST00000362701 134 ntBASIC-1.36□□□□□ -2.63
APOC1P02654 RNU6-888P-201ENST00000363010 101 ntBASIC-1.36□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms