Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.25□□□□□ -2.61
TNFP01375 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU6-522P-201ENST00000364497 107 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU6-281P-201ENST00000384212 103 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU6-601P-201ENST00000384540 107 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU7-25P-201ENST00000516544 62 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU6-980P-201ENST00000516925 103 ntBASIC-1.25□□□□□ -2.61
TNFP01375 AC060788.1-201ENST00000521318 469 ntBASIC-1.25□□□□□ -2.61
TNFP01375 AL627230.5-201ENST00000619807 58 ntBASIC-1.25□□□□□ -2.61
TNFP01375 AL138960.2-201ENST00000625145 535 ntBASIC-1.25□□□□□ -2.61
TNFP01375 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.26□□□□□ -2.61
TNFP01375 RNU6-541P-201ENST00000384709 110 ntBASIC-1.26□□□□□ -2.61
TNFP01375 MIR599-201ENST00000385069 95 ntBASIC-1.26□□□□□ -2.61
TNFP01375 MTCYBP8-201ENST00000422855 651 ntBASIC-1.26□□□□□ -2.61
TNFP01375 RNU6-1208P-201ENST00000459588 107 ntBASIC-1.26□□□□□ -2.61
TNFP01375 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.26□□□□□ -2.61
TNFP01375 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.26□□□□□ -2.61
TNFP01375 AC008507.4-201ENST00000585464 127 ntBASIC-1.26□□□□□ -2.61
TNFP01375 AC093783.1-201ENST00000612976 329 ntBASIC-1.26□□□□□ -2.61
TNFP01375 AL391262.2-201ENST00000622466 494 ntBASIC-1.26□□□□□ -2.61
TNFP01375 AC091931.1-201ENST00000623488 728 ntBASIC-1.26□□□□□ -2.61
TNFP01375 AL163152.1-201ENST00000642001 374 ntBASIC-1.26□□□□□ -2.61
TNFP01375 SNORD115-34-201ENST00000362441 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-21-201ENST00000362963 81 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-14-201ENST00000363090 81 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-13-201ENST00000363358 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-5-201ENST00000363633 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-4-201ENST00000363810 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-16-201ENST00000363887 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-15-201ENST00000364809 81 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-1-201ENST00000364961 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-26-201ENST00000365067 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-10-201ENST00000365073 81 ntBASIC-1.27□□□□□ -2.61
TNFP01375 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORA72-201ENST00000384339 132 ntBASIC-1.27□□□□□ -2.61
TNFP01375 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.27□□□□□ -2.61
TNFP01375 RNY3P4-201ENST00000384428 101 ntBASIC-1.27□□□□□ -2.61
TNFP01375 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.27□□□□□ -2.61
TNFP01375 RNU2-9P-201ENST00000410194 145 ntBASIC-1.27□□□□□ -2.61
TNFP01375 RNA5SP237-201ENST00000410414 113 ntBASIC-1.27□□□□□ -2.61
TNFP01375 GPR143P-201ENST00000434155 205 ntBASIC-1.27□□□□□ -2.61
TNFP01375 U8.22-201ENST00000459141 133 ntBASIC-1.27□□□□□ -2.61
TNFP01375 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC-1.27□□□□□ -2.61
TNFP01375 AC055872.1-201ENST00000570978 278 ntBASIC-1.27□□□□□ -2.61
TNFP01375 SNORD115-40-201ENST00000606510 82 ntBASIC-1.27□□□□□ -2.61
TNFP01375 AC090617.8-201ENST00000623339 167 ntBASIC-1.27□□□□□ -2.61
TNFP01375 MIR664B-201ENST00000626756 61 ntBASIC-1.27□□□□□ -2.61
TNFP01375 RNA5SP133-201ENST00000363368 119 ntBASIC-1.28□□□□□ -2.61
TNFP01375 RNU6-164P-201ENST00000364604 103 ntBASIC-1.28□□□□□ -2.61
TNFP01375 RNA5SP331-201ENST00000364986 107 ntBASIC-1.28□□□□□ -2.61
TNFP01375 RNU6-456P-201ENST00000384493 107 ntBASIC-1.28□□□□□ -2.61
TNFP01375 MIR626-201ENST00000385032 94 ntBASIC-1.28□□□□□ -2.61
TNFP01375 MIRLET7B-201ENST00000385140 83 ntBASIC-1.28□□□□□ -2.61
TNFP01375 RNU6-576P-201ENST00000390854 102 ntBASIC-1.28□□□□□ -2.61
TNFP01375 CCDC34P1-201ENST00000507441 517 ntBASIC-1.28□□□□□ -2.61
TNFP01375 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.28□□□□□ -2.61
TNFP01375 MIR6773-201ENST00000612812 74 ntBASIC-1.28□□□□□ -2.61
TNFP01375 MIR6717-201ENST00000622747 73 ntBASIC-1.28□□□□□ -2.61
TNFP01375 RNY4P6-201ENST00000363667 96 ntBASIC-1.29□□□□□ -2.62
TNFP01375 SNORD115-30-201ENST00000364117 82 ntBASIC-1.29□□□□□ -2.62
TNFP01375 MIR617-201ENST00000385030 97 ntBASIC-1.29□□□□□ -2.62
TNFP01375 RPL39P25-201ENST00000449384 154 ntBASIC-1.29□□□□□ -2.62
TNFP01375 SNORA19.3-201ENST00000516165 130 ntBASIC-1.29□□□□□ -2.62
TNFP01375 Vault.3-201ENST00000516676 95 ntBASIC-1.29□□□□□ -2.62
TNFP01375 MIR4308-201ENST00000580634 81 ntBASIC-1.29□□□□□ -2.62
TNFP01375 AL359881.1-201ENST00000602916 267 ntBASIC-1.29□□□□□ -2.62
TNFP01375 AL133173.2-201ENST00000614270 90 ntBASIC-1.29□□□□□ -2.62
TNFP01375 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-1.29□□□□□ -2.62
TNFP01375 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.3□□□□□ -2.62
TNFP01375 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.3□□□□□ -2.62
TNFP01375 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.3□□□□□ -2.62
TNFP01375 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.3□□□□□ -2.62
TNFP01375 SNORD114-3-201ENST00000364969 75 ntBASIC-1.3□□□□□ -2.62
TNFP01375 RNU6-108P-201ENST00000365558 107 ntBASIC-1.3□□□□□ -2.62
TNFP01375 RNU6-767P-201ENST00000384132 107 ntBASIC-1.3□□□□□ -2.62
TNFP01375 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.3□□□□□ -2.62
TNFP01375 Y_RNA.456-201ENST00000384232 111 ntBASIC-1.3□□□□□ -2.62
TNFP01375 AL365203.2-201ENST00000423444 196 ntBASIC-1.3□□□□□ -2.62
TNFP01375 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.3□□□□□ -2.62
TNFP01375 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-1.3□□□□□ -2.62
TNFP01375 MIR4460-201ENST00000577862 86 ntBASIC-1.3□□□□□ -2.62
TNFP01375 MIR3139-201ENST00000579145 76 ntBASIC-1.3□□□□□ -2.62
TNFP01375 AL133215.3-201ENST00000609801 448 ntBASIC-1.3□□□□□ -2.62
TNFP01375 U6.109-201ENST00000636749 87 ntBASIC-1.3□□□□□ -2.62
TNFP01375 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.31□□□□□ -2.62
TNFP01375 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.31□□□□□ -2.62
TNFP01375 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.31□□□□□ -2.62
TNFP01375 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.31□□□□□ -2.62
TNFP01375 SNORA51.5-201ENST00000384126 131 ntBASIC-1.31□□□□□ -2.62
TNFP01375 RNU6-903P-201ENST00000391270 109 ntBASIC-1.31□□□□□ -2.62
TNFP01375 RNU2-14P-201ENST00000411053 191 ntBASIC-1.31□□□□□ -2.62
TNFP01375 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.31□□□□□ -2.62
TNFP01375 AC100767.1-201ENST00000528178 123 ntBASIC-1.31□□□□□ -2.62
TNFP01375 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.31□□□□□ -2.62
TNFP01375 AL353803.5-201ENST00000599815 141 ntBASIC-1.31□□□□□ -2.62
TNFP01375 AL049861.1-201ENST00000603130 150 ntBASIC-1.31□□□□□ -2.62
TNFP01375 AC124303.1-201ENST00000605703 360 ntBASIC-1.31□□□□□ -2.62
TNFP01375 AC084781.2-201ENST00000615568 161 ntBASIC-1.31□□□□□ -2.62
TNFP01375 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms