Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 AC013791.1-201ENST00000616619 62 ntBASIC0.14□□□□□ -2.39
SEMA3DO95025 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.14□□□□□ -2.39
SEMA3DO95025 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.14□□□□□ -2.39
SEMA3DO95025 Y_RNA.136-201ENST00000363444 102 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 SNORA27-201ENST00000384323 126 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 RNA5SP496-201ENST00000391240 109 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 MIR1257-201ENST00000408490 117 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 RNU6-1190P-201ENST00000410811 104 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 MTCO1P5-201ENST00000433573 344 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 AC087499.4-201ENST00000448505 178 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.13□□□□□ -2.39
SEMA3DO95025 snoU13.2-201ENST00000459201 104 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 SNORD36C-201ENST00000516733 66 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 MIR3678-201ENST00000578455 94 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 SNORD92-201ENST00000585078 85 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 RAC1P9-201ENST00000604990 392 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 MIR376A1-201ENST00000616574 68 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
SEMA3DO95025 MIR367-201ENST00000362299 68 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 SNORA1.1-201ENST00000364671 133 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 Y_RNA.356-201ENST00000365475 113 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 Y_RNA.424-201ENST00000384063 103 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 Y_RNA.569-201ENST00000384749 103 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 MIR548A2-201ENST00000384956 97 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 SNORD12C-201ENST00000386307 89 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 Y_RNA.579-201ENST00000390939 94 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 Y_RNA.587-201ENST00000391210 103 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 AL138752.1-201ENST00000452964 351 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 RPS29P24-201ENST00000486345 171 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 SNORD77.4-201ENST00000516158 81 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 RNU6-875P-201ENST00000516488 106 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 RNU7-53P-201ENST00000516705 60 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 MIR5692C2-201ENST00000577959 77 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 MIR4431-201ENST00000579990 94 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 MIR4768-201ENST00000585270 74 ntBASIC0.12□□□□□ -2.39
SEMA3DO95025 SNORD118-201ENST00000363593 134 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 Y_RNA.293-201ENST00000364908 93 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 Y_RNA.303-201ENST00000364998 94 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 RNA5SP117-201ENST00000365294 118 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 RNU6-815P-201ENST00000384080 113 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 SNORD61-201ENST00000384252 73 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 SNORA8.2-201ENST00000384372 139 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 MIR1302-11-201ENST00000408051 138 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 MIR1302-9-201ENST00000408365 138 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 MIR1302-10-201ENST00000408734 138 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 Y_RNA.639-201ENST00000458981 102 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 Y_RNA.715-201ENST00000517082 110 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 RNU6-1270P-201ENST00000517128 108 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 MIR4724-201ENST00000579485 89 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 MIR1302-2-201ENST00000607096 138 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 AC078938.1-201ENST00000620993 318 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 AC112487.2-201ENST00000637950 304 ntBASIC0.11□□□□□ -2.39
SEMA3DO95025 Y_RNA.197-201ENST00000364004 102 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 RNU4-10P-201ENST00000364383 140 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 Y_RNA.567-201ENST00000384736 106 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 SNORD115-46-201ENST00000390982 71 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 MTCO2P24-201ENST00000515611 426 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 RNU6-507P-201ENST00000516045 100 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 AC133485.4-201ENST00000561835 220 ntBASIC0.1□□□□□ -2.39
SEMA3DO95025 MIR30D-201ENST00000362283 70 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 Y_RNA.7-201ENST00000362352 102 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNU4-90P-201ENST00000362773 141 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNU6-1272P-201ENST00000362776 107 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNA5SP257-201ENST00000363023 116 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 Y_RNA.445-201ENST00000384168 102 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 MIR563-201ENST00000385080 79 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 PMCHL1-202ENST00000423102 261 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 AC073261.1-201ENST00000429409 121 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNU2-11P-201ENST00000459191 187 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNU6-475P-201ENST00000516073 104 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNU2-31P-201ENST00000516954 155 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RNU6-448P-201ENST00000517052 107 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
SEMA3DO95025 AC100767.1-201ENST00000528178 123 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 uc_338.16-201ENST00000621804 95 ntBASIC0.09□□□□□ -2.4
SEMA3DO95025 Y_RNA.105-201ENST00000363182 111 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 Y_RNA.183-201ENST00000363882 113 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 Y_RNA.251-201ENST00000364551 99 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 RNU6-662P-201ENST00000384253 104 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 RNU6-897P-201ENST00000517135 105 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.08□□□□□ -2.4
SEMA3DO95025 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.08□□□□□ -2.4
SEMA3DO95025 MIR4662B-201ENST00000579498 81 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 AC124312.5-201ENST00000604451 268 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 MIR6718-201ENST00000616153 80 ntBASIC0.08□□□□□ -2.4
SEMA3DO95025 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.07□□□□□ -2.4
SEMA3DO95025 MIR342-201ENST00000362212 99 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 Y_RNA.30-201ENST00000362572 97 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 SNORA36.1-201ENST00000363424 132 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 RNU6-450P-201ENST00000364654 107 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 Y_RNA.263-201ENST00000364659 114 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 SNORD24-201ENST00000383884 75 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 Y_RNA.394-201ENST00000383942 103 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 SNORD77.3-201ENST00000391113 65 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 MIR548I3-201ENST00000408378 149 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 Y_RNA.617-201ENST00000410920 90 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 AF228730.3-201ENST00000436691 102 ntBASIC0.07□□□□□ -2.4
SEMA3DO95025 RNU6-863P-201ENST00000515989 104 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms