Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNA5SP364-201ENST00000516938 78 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 IGKV1-22-201ENST00000524313 326 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 MTND5P34-201ENST00000568888 325 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.39□□□□□ -2.03
PRPF40AO75400 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 MIR3935-201ENST00000583472 104 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 MIR4448-201ENST00000584360 86 ntBASIC2.39□□□□□ -2.03
PRPF40AO75400 AL023284.1-201ENST00000403956 276 ntBASIC2.38□□□□□ -2.03
PRPF40AO75400 RNA5SP136-201ENST00000410906 107 ntBASIC2.38□□□□□ -2.03
PRPF40AO75400 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.38□□□□□ -2.03
PRPF40AO75400 AL121890.5-201ENST00000620848 304 ntBASIC2.38□□□□□ -2.03
PRPF40AO75400 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.38□□□□□ -2.03
PRPF40AO75400 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
PRPF40AO75400 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
PRPF40AO75400 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PRPF40AO75400 SNORA51.10-201ENST00000384418 136 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 Y_RNA.528-201ENST00000384575 108 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 Y_RNA.537-201ENST00000384626 109 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 RNU6-476P-201ENST00000384726 107 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 MIR520C-201ENST00000385005 87 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 MIR653-201ENST00000385279 96 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 SNORD33.1-201ENST00000516213 88 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 MIR514B-201ENST00000516774 80 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 SNORA44.1-201ENST00000517031 108 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 MIR4791-201ENST00000607666 84 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.37□□□□□ -2.03
PRPF40AO75400 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRPF40AO75400 MIR548A3-201ENST00000385297 97 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 SUMO2P12-201ENST00000405924 140 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 AL356379.1-201ENST00000414105 126 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 SNORA77B-201ENST00000578179 125 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 MIR4764-201ENST00000580680 88 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 AL670379.3-201ENST00000605040 251 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 AL627230.6-201ENST00000611129 280 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 MIR8063-201ENST00000621930 81 ntBASIC2.36□□□□□ -2.03
PRPF40AO75400 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PRPF40AO75400 MTND5P18-201ENST00000445624 1801 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 RNU7-164P-201ENST00000459221 62 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 RNU2-13P-201ENST00000515909 113 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 RNU6-922P-201ENST00000516753 99 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 MIR4305-201ENST00000583252 102 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 HSPE1P19-201ENST00000603327 295 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 AL359851.1-201ENST00000569460 4997 ntBASIC2.35□□□□□ -2.03
PRPF40AO75400 WWP1P1-201ENST00000466609 2769 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 SNORA24-201ENST00000384096 131 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 RNU6-1144P-201ENST00000384247 104 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 MIRLET7F2-201ENST00000385277 83 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PRPF40AO75400 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
PRPF40AO75400 HMGN2P19-201ENST00000425149 265 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 snoU13.9-201ENST00000458927 103 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 RNA5SP233-201ENST00000459153 113 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.34□□□□□ -2.03
PRPF40AO75400 RNY4P20-201ENST00000516678 93 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 AC015688.6-201ENST00000577737 104 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.34□□□□□ -2.03
PRPF40AO75400 AC103810.8-201ENST00000607347 118 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 AC021613.1-201ENST00000623880 111 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 AC008133.2-201ENST00000624540 351 ntBASIC2.34□□□□□ -2.03
PRPF40AO75400 MIR30A-201ENST00000385092 71 ntBASIC2.33□□□□□ -2.04
PRPF40AO75400 RNA5SP261-201ENST00000410536 106 ntBASIC2.33□□□□□ -2.04
PRPF40AO75400 RN7SL274P-201ENST00000492268 272 ntBASIC2.33□□□□□ -2.04
PRPF40AO75400 MIR3152-201ENST00000579801 74 ntBASIC2.33□□□□□ -2.04
PRPF40AO75400 MIR3683-201ENST00000580847 82 ntBASIC2.33□□□□□ -2.04
PRPF40AO75400 AL513534.2-201ENST00000603836 250 ntBASIC2.33□□□□□ -2.04
PRPF40AO75400 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PRPF40AO75400 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
PRPF40AO75400 AC092881.1-201ENST00000638218 2733 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 RNU6-1325P-201ENST00000364905 105 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 Y_RNA.298-201ENST00000364960 107 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 SNORD20-201ENST00000384550 80 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 MIR759-201ENST00000390224 91 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 RNU7-73P-201ENST00000458743 63 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 Y_RNA.649-201ENST00000459077 103 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 COX6CP6-201ENST00000490840 228 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 SNORD111.1-201ENST00000516421 86 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 DNAJC19P9-201ENST00000555084 351 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 MIR5089-201ENST00000580047 84 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 SNRPGP19-201ENST00000603826 189 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.32□□□□□ -2.04
PRPF40AO75400 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 uc_338.20-201ENST00000621563 178 ntBASIC2.32□□□□□ -2.04
PRPF40AO75400 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PRPF40AO75400 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 RNA5SP489-201ENST00000410986 109 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 AL022718.1-201ENST00000412004 84 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 HSPE1P24-201ENST00000450782 238 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 snoU13.16-201ENST00000459350 104 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 snoU13.26-201ENST00000459452 105 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 RNU7-45P-201ENST00000459460 63 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 IGKV3-31-201ENST00000523109 329 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 AL357312.1-201ENST00000603879 298 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 Y_RNA.783-201ENST00000613546 102 ntBASIC2.31□□□□□ -2.04
PRPF40AO75400 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
PRPF40AO75400 Y_RNA.213-201ENST00000364178 111 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 SNORA67.3-201ENST00000384366 140 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 MIR676-201ENST00000390702 67 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 HMGN2P23-201ENST00000456759 269 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 RNU6-893P-201ENST00000458841 100 ntBASIC2.3□□□□□ -2.04
PRPF40AO75400 snoU13.15-201ENST00000459407 104 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 238.7 ms