Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 SNORD115-13-201ENST00000363358 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-41-201ENST00000363608 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-11-201ENST00000363616 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-5-201ENST00000363633 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-39-201ENST00000363694 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-4-201ENST00000363810 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-16-201ENST00000363887 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-6-201ENST00000363942 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 Y_RNA.191-201ENST00000363972 113 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-42-201ENST00000364273 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-15-201ENST00000364809 81 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-1-201ENST00000364961 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-26-201ENST00000365067 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-10-201ENST00000365073 81 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-43-201ENST00000365503 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-36-201ENST00000365629 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORA1-201ENST00000384107 130 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.56□□□□□ -2.16
CTNND1O60716 AC004223.1-201ENST00000479840 271 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 RPS26P48-201ENST00000491713 339 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 RNU2-13P-201ENST00000515909 113 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 MIR4452-201ENST00000583004 71 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 SNORD115-40-201ENST00000606510 82 ntBASIC1.56□□□□□ -2.16
CTNND1O60716 RNU6-978P-201ENST00000364371 103 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 SNORD26-201ENST00000384147 75 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 MIR570-201ENST00000384917 97 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 SNORA40.6-201ENST00000391153 128 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 AC245047.7-201ENST00000440265 293 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 AC048334.1-201ENST00000477975 159 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 MIR4791-201ENST00000607666 84 ntBASIC1.55□□□□□ -2.16
CTNND1O60716 RNA5SP48-201ENST00000363969 126 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 Y_RNA.240-201ENST00000364469 95 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 RNU6-1292P-201ENST00000383856 107 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 RNU6-1189P-201ENST00000383958 107 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 SNORA51.10-201ENST00000384418 136 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 Y_RNA.494-201ENST00000384432 111 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 SNORD77.3-201ENST00000391113 65 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 snoU13.25-201ENST00000458945 104 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 SNORA31.2-201ENST00000516019 134 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 SNORA31.4-201ENST00000516049 129 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 SNORD36C-201ENST00000516733 66 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 RNU6-861P-201ENST00000516745 106 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 MIR3129-201ENST00000581095 76 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 SNORA4-201ENST00000584302 138 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 AL365205.2-201ENST00000594586 68 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 AC243994.1-201ENST00000618627 109 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 MIR4251-201ENST00000635819 61 ntBASIC1.54□□□□□ -2.16
CTNND1O60716 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
CTNND1O60716 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CTNND1O60716 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.53□□□□□ -2.16
CTNND1O60716 Y_RNA.357-201ENST00000365487 109 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 Y_RNA.521-201ENST00000384560 114 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 SEPT7P4-201ENST00000437076 306 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 Y_RNA.662-201ENST00000516028 97 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 SNORA18.4-201ENST00000516440 124 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 PRELID3BP2-201ENST00000605362 201 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 MIR7974-201ENST00000615835 79 ntBASIC1.53□□□□□ -2.16
CTNND1O60716 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.52□□□□□ -2.17
CTNND1O60716 RNU6-682P-201ENST00000363843 106 ntBASIC1.52□□□□□ -2.17
CTNND1O60716 SNORA27-201ENST00000384323 126 ntBASIC1.52□□□□□ -2.17
CTNND1O60716 AC107027.2-201ENST00000512197 115 ntBASIC1.52□□□□□ -2.17
CTNND1O60716 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.52□□□□□ -2.17
CTNND1O60716 RNA5SP327-201ENST00000362494 101 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 SNORA25.7-201ENST00000364375 127 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 Y_RNA.337-201ENST00000365312 102 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 SNORD114-22-201ENST00000365423 72 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 SNORA70.7-201ENST00000384159 133 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 MIR489-201ENST00000384923 84 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 RPS29P29-201ENST00000456396 171 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 RNU7-67P-201ENST00000459003 62 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 snoU13.18-201ENST00000459483 104 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 RNA5SP61-201ENST00000516453 100 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 AC090821.2-201ENST00000523552 176 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 AP003716.2-201ENST00000528260 108 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 MTND1P7-201ENST00000632801 297 ntBASIC1.51□□□□□ -2.17
CTNND1O60716 RNA5SP264-201ENST00000363115 107 ntBASIC1.5□□□□□ -2.17
CTNND1O60716 RNU6-597P-201ENST00000365620 102 ntBASIC1.5□□□□□ -2.17
CTNND1O60716 SNORA24-201ENST00000384096 131 ntBASIC1.5□□□□□ -2.17
CTNND1O60716 Y_RNA.440-201ENST00000384120 114 ntBASIC1.5□□□□□ -2.17
CTNND1O60716 RNU6-907P-201ENST00000390924 102 ntBASIC1.5□□□□□ -2.17
CTNND1O60716 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.5□□□□□ -2.17
CTNND1O60716 SNORA70.22-201ENST00000517160 124 ntBASIC1.5□□□□□ -2.17
CTNND1O60716 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CTNND1O60716 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
CTNND1O60716 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
CTNND1O60716 RNU6-239P-201ENST00000390990 99 ntBASIC1.49□□□□□ -2.17
CTNND1O60716 RNU6-955P-201ENST00000410497 104 ntBASIC1.49□□□□□ -2.17
CTNND1O60716 RPS29P24-201ENST00000486345 171 ntBASIC1.49□□□□□ -2.17
CTNND1O60716 RNU6-958P-201ENST00000516995 106 ntBASIC1.49□□□□□ -2.17
CTNND1O60716 MIR96-201ENST00000362288 78 ntBASIC1.48□□□□□ -2.17
CTNND1O60716 Y_RNA.393-201ENST00000383936 102 ntBASIC1.48□□□□□ -2.17
CTNND1O60716 Y_RNA.441-201ENST00000384123 112 ntBASIC1.48□□□□□ -2.17
CTNND1O60716 RNA5SP127-201ENST00000411051 133 ntBASIC1.48□□□□□ -2.17
CTNND1O60716 RNU2-64P-201ENST00000411315 191 ntBASIC1.48□□□□□ -2.17
CTNND1O60716 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
CTNND1O60716 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CTNND1O60716 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 RNU4-84P-201ENST00000364200 139 ntBASIC1.47□□□□□ -2.17
CTNND1O60716 Y_RNA.363-201ENST00000365529 113 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms