Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 Y_RNA.357-201ENST00000365487 109 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 SNORA1-201ENST00000384107 130 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 RNU2-64P-201ENST00000411315 191 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 AC107027.2-201ENST00000512197 115 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
PRPF3O43395 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PRPF3O43395 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
PRPF3O43395 RNU6-978P-201ENST00000364371 103 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 Y_RNA.521-201ENST00000384560 114 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 SNORA40.5-201ENST00000391061 128 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 AF228730.3-201ENST00000436691 102 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 AP003484.1-201ENST00000530974 250 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 AL096861.1-201ENST00000610899 123 ntBASIC1.57□□□□□ -2.16
PRPF3O43395 Y_RNA.241-201ENST00000364470 117 ntBASIC1.56□□□□□ -2.16
PRPF3O43395 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.56□□□□□ -2.16
PRPF3O43395 SNORD36C-201ENST00000516733 66 ntBASIC1.56□□□□□ -2.16
PRPF3O43395 MIR3129-201ENST00000581095 76 ntBASIC1.56□□□□□ -2.16
PRPF3O43395 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
PRPF3O43395 FTX_2.1-201ENST00000618816 94 ntBASIC1.56□□□□□ -2.16
PRPF3O43395 Y_RNA.270-201ENST00000364693 104 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 Y_RNA.466-201ENST00000384294 113 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 MIR570-201ENST00000384917 97 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 RNU5E-9P-201ENST00000411164 104 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 RNU6-938P-201ENST00000411285 103 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.55□□□□□ -2.16
PRPF3O43395 AC074198.2-201ENST00000508153 258 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 RNU7-41P-201ENST00000515917 61 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.55□□□□□ -2.16
PRPF3O43395 MIR3192-201ENST00000584920 77 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 AL365205.2-201ENST00000594586 68 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 AC098479.1-201ENST00000609225 154 ntBASIC1.55□□□□□ -2.16
PRPF3O43395 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 RNU6-392P-201ENST00000364926 101 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 Y_RNA.337-201ENST00000365312 102 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 RNU6-1292P-201ENST00000383856 107 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 RNU6-1189P-201ENST00000383958 107 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 SNORA51.10-201ENST00000384418 136 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 MIR758-201ENST00000390227 88 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 SNORD77.3-201ENST00000391113 65 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 RNU2-13P-201ENST00000515909 113 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 SNORA31.2-201ENST00000516019 134 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 SNORA70.22-201ENST00000517160 124 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.54□□□□□ -2.16
PRPF3O43395 AC090821.2-201ENST00000523552 176 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 MIR4421-201ENST00000578133 69 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 MIR4251-201ENST00000635819 61 ntBASIC1.54□□□□□ -2.16
PRPF3O43395 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.53□□□□□ -2.16
PRPF3O43395 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PRPF3O43395 RNU4-84P-201ENST00000364200 139 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 SNORA25.7-201ENST00000364375 127 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 Y_RNA.441-201ENST00000384123 112 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 SNORA80D-201ENST00000384488 135 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 RNU6-907P-201ENST00000390924 102 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 RNU6-239P-201ENST00000390990 99 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 RPS29P29-201ENST00000456396 171 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 RPS26P48-201ENST00000491713 339 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 RNU1-92P-201ENST00000517017 135 ntBASIC1.53□□□□□ -2.16
PRPF3O43395 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
PRPF3O43395 Y_RNA.150-201ENST00000363562 102 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 SNORA25.8-201ENST00000364831 128 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 RNU6-597P-201ENST00000365620 102 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 Y_RNA.393-201ENST00000383936 102 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 SNORA24-201ENST00000384096 131 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.52□□□□□ -2.17
PRPF3O43395 SNORA18.4-201ENST00000516440 124 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 AC068338.1-201ENST00000565567 176 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 PRELID3BP2-201ENST00000605362 201 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 MIR4791-201ENST00000607666 84 ntBASIC1.52□□□□□ -2.17
PRPF3O43395 RNA5SP264-201ENST00000363115 107 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 SNORA27-201ENST00000384323 126 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 SNORA25-201ENST00000384384 134 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 Y_RNA.494-201ENST00000384432 111 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 RNU6-768P-201ENST00000384683 107 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
PRPF3O43395 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
PRPF3O43395 snoU13.16-201ENST00000459350 104 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 RNU7-53P-201ENST00000516705 60 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 MIR3660-201ENST00000584845 100 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 AC243994.1-201ENST00000618627 109 ntBASIC1.51□□□□□ -2.17
PRPF3O43395 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.51□□□□□ -2.17
PRPF3O43395 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
PRPF3O43395 SNORA7.1-201ENST00000363750 139 ntBASIC1.5□□□□□ -2.17
PRPF3O43395 RNU6-886P-201ENST00000384319 105 ntBASIC1.5□□□□□ -2.17
PRPF3O43395 RNA5SP127-201ENST00000411051 133 ntBASIC1.5□□□□□ -2.17
PRPF3O43395 AL591704.2-201ENST00000421658 181 ntBASIC1.5□□□□□ -2.17
PRPF3O43395 AC048334.1-201ENST00000477975 159 ntBASIC1.5□□□□□ -2.17
PRPF3O43395 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.5□□□□□ -2.17
PRPF3O43395 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
PRPF3O43395 Y_RNA.272-201ENST00000364696 102 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 Y_RNA.440-201ENST00000384120 114 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 MIR489-201ENST00000384923 84 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 MIR624-201ENST00000385217 97 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 MIR618-201ENST00000385287 98 ntBASIC1.49□□□□□ -2.17
PRPF3O43395 SNORA40.6-201ENST00000391153 128 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms