Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
CUX2O14529 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
CUX2O14529 AL133255.1-201ENST00000606374 441 ntBASIC0.42□□□□□ -2.34
CUX2O14529 SNORD115-28-201ENST00000363931 81 ntBASIC0.41□□□□□ -2.34
CUX2O14529 Y_RNA.431-201ENST00000384086 102 ntBASIC0.41□□□□□ -2.34
CUX2O14529 MT-TD-201ENST00000387419 68 ntBASIC0.41□□□□□ -2.34
CUX2O14529 AC087499.4-201ENST00000448505 178 ntBASIC0.41□□□□□ -2.34
CUX2O14529 Y_RNA.637-201ENST00000459424 114 ntBASIC0.41□□□□□ -2.34
CUX2O14529 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.41□□□□□ -2.34
CUX2O14529 RNU6-897P-201ENST00000517135 105 ntBASIC0.41□□□□□ -2.34
CUX2O14529 AC100767.1-201ENST00000528178 123 ntBASIC0.41□□□□□ -2.34
CUX2O14529 C8orf59P2-201ENST00000603441 271 ntBASIC0.41□□□□□ -2.34
CUX2O14529 AC134878.1-201ENST00000619901 243 ntBASIC0.41□□□□□ -2.34
CUX2O14529 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CUX2O14529 SNORD45.3-201ENST00000363836 72 ntBASIC0.41□□□□□ -2.34
CUX2O14529 Y_RNA.389-201ENST00000383924 113 ntBASIC0.41□□□□□ -2.34
CUX2O14529 Y_RNA.418-201ENST00000384029 102 ntBASIC0.41□□□□□ -2.34
CUX2O14529 RNU6-679P-201ENST00000391003 106 ntBASIC0.41□□□□□ -2.34
CUX2O14529 Y_RNA.587-201ENST00000391210 103 ntBASIC0.41□□□□□ -2.34
CUX2O14529 RNU7-56P-201ENST00000458744 62 ntBASIC0.41□□□□□ -2.34
CUX2O14529 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.41□□□□□ -2.34
CUX2O14529 MIR377-201ENST00000362145 69 ntBASIC0.4□□□□□ -2.35
CUX2O14529 MIR369-201ENST00000362155 70 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-34-201ENST00000362441 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-12-201ENST00000362583 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-29-201ENST00000362834 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-9-201ENST00000362912 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-21-201ENST00000362963 81 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-14-201ENST00000363090 81 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD114-31-201ENST00000363219 75 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-13-201ENST00000363358 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-41-201ENST00000363608 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-11-201ENST00000363616 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-5-201ENST00000363633 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-39-201ENST00000363694 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-4-201ENST00000363810 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-16-201ENST00000363887 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-6-201ENST00000363942 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-42-201ENST00000364273 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-15-201ENST00000364809 81 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-1-201ENST00000364961 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-26-201ENST00000365067 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-10-201ENST00000365073 81 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-43-201ENST00000365503 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-36-201ENST00000365629 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORA53-201ENST00000391141 249 ntBASIC0.4□□□□□ -2.35
CUX2O14529 MTND4P19-201ENST00000446659 478 ntBASIC0.4□□□□□ -2.35
CUX2O14529 HSPE1P25-201ENST00000455484 251 ntBASIC0.4□□□□□ -2.35
CUX2O14529 Y_RNA.715-201ENST00000517082 110 ntBASIC0.4□□□□□ -2.35
CUX2O14529 MIR4804-201ENST00000581683 73 ntBASIC0.4□□□□□ -2.35
CUX2O14529 MIR4768-201ENST00000585270 74 ntBASIC0.4□□□□□ -2.35
CUX2O14529 SNORD115-40-201ENST00000606510 82 ntBASIC0.4□□□□□ -2.35
CUX2O14529 MIR8055-201ENST00000610739 97 ntBASIC0.4□□□□□ -2.35
CUX2O14529 Y_RNA.486-201ENST00000384398 107 ntBASIC0.39□□□□□ -2.35
CUX2O14529 RNU6-823P-201ENST00000391042 103 ntBASIC0.39□□□□□ -2.35
CUX2O14529 MTCO1P5-201ENST00000433573 344 ntBASIC0.39□□□□□ -2.35
CUX2O14529 MTND4LP30-201ENST00000454092 297 ntBASIC0.39□□□□□ -2.35
CUX2O14529 RN7SKP12-201ENST00000516275 143 ntBASIC0.39□□□□□ -2.35
CUX2O14529 Y_RNA.721-201ENST00000517207 102 ntBASIC0.39□□□□□ -2.35
CUX2O14529 MIR4662B-201ENST00000579498 81 ntBASIC0.39□□□□□ -2.35
CUX2O14529 AC037487.3-201ENST00000606668 112 ntBASIC0.39□□□□□ -2.35
CUX2O14529 RNU6-1138P-201ENST00000365359 106 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-364P-201ENST00000384387 107 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR573-201ENST00000384964 99 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-1319P-201ENST00000390855 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-747P-201ENST00000390928 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-241P-201ENST00000391148 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-447P-201ENST00000410293 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-1118P-201ENST00000410382 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-1076P-201ENST00000410397 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-355P-201ENST00000410427 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-791P-201ENST00000410467 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-705P-201ENST00000410601 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-1100P-201ENST00000410691 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-860P-201ENST00000410860 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-177P-201ENST00000411257 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-1217P-201ENST00000411276 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-785P-201ENST00000411324 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 AC090844.1-201ENST00000422019 156 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR18B-201ENST00000454574 71 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU7-62P-201ENST00000458856 62 ntBASIC0.38□□□□□ -2.35
CUX2O14529 RNU6-365P-201ENST00000517113 106 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR3612-201ENST00000579753 87 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR4801-201ENST00000582704 82 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR4676-201ENST00000583078 72 ntBASIC0.38□□□□□ -2.35
CUX2O14529 U6.90-201ENST00000614007 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 U6.70-201ENST00000620287 104 ntBASIC0.38□□□□□ -2.35
CUX2O14529 MIR367-201ENST00000362299 68 ntBASIC0.37□□□□□ -2.35
CUX2O14529 MIR18A-201ENST00000362310 71 ntBASIC0.37□□□□□ -2.35
CUX2O14529 RNU6-369P-201ENST00000362515 102 ntBASIC0.37□□□□□ -2.35
CUX2O14529 SNORA63C-201ENST00000364578 129 ntBASIC0.37□□□□□ -2.35
CUX2O14529 Y_RNA.395-201ENST00000383945 109 ntBASIC0.37□□□□□ -2.35
CUX2O14529 SNORA27-201ENST00000384323 126 ntBASIC0.37□□□□□ -2.35
CUX2O14529 MIR938-201ENST00000401216 83 ntBASIC0.37□□□□□ -2.35
CUX2O14529 MIR1252-201ENST00000408861 65 ntBASIC0.37□□□□□ -2.35
CUX2O14529 AC022028.1-201ENST00000412054 408 ntBASIC0.37□□□□□ -2.35
CUX2O14529 PMCHL1-202ENST00000423102 261 ntBASIC0.37□□□□□ -2.35
CUX2O14529 RPS29P8-201ENST00000445109 171 ntBASIC0.37□□□□□ -2.35
CUX2O14529 RNU2-31P-201ENST00000516954 155 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms