Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU6-702P-201ENST00000364982 107 ntBASIC0.88□□□□□ -2.27
RTCAO00442 RNU6-196P-201ENST00000384315 107 ntBASIC0.88□□□□□ -2.27
RTCAO00442 RNU6-463P-201ENST00000384340 107 ntBASIC0.88□□□□□ -2.27
RTCAO00442 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.88□□□□□ -2.27
RTCAO00442 RNU7-73P-201ENST00000458743 63 ntBASIC0.88□□□□□ -2.27
RTCAO00442 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
RTCAO00442 RNU6-693P-201ENST00000516134 107 ntBASIC0.88□□□□□ -2.27
RTCAO00442 RNU4-71P-201ENST00000516258 113 ntBASIC0.88□□□□□ -2.27
RTCAO00442 RNU6-453P-201ENST00000516819 85 ntBASIC0.88□□□□□ -2.27
RTCAO00442 AL162730.1-201ENST00000605734 292 ntBASIC0.88□□□□□ -2.27
RTCAO00442 AC103810.9-201ENST00000606688 112 ntBASIC0.88□□□□□ -2.27
RTCAO00442 MTND1P7-201ENST00000632801 297 ntBASIC0.88□□□□□ -2.27
RTCAO00442 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
RTCAO00442 MIR96-201ENST00000362288 78 ntBASIC0.87□□□□□ -2.27
RTCAO00442 Y_RNA.54-201ENST00000362766 105 ntBASIC0.87□□□□□ -2.27
RTCAO00442 SNORA25.3-201ENST00000363205 127 ntBASIC0.87□□□□□ -2.27
RTCAO00442 SNORD45.3-201ENST00000363836 72 ntBASIC0.87□□□□□ -2.27
RTCAO00442 RNU2-70P-201ENST00000410718 179 ntBASIC0.87□□□□□ -2.27
RTCAO00442 RPS3AP1-201ENST00000413190 320 ntBASIC0.87□□□□□ -2.27
RTCAO00442 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.87□□□□□ -2.27
RTCAO00442 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.87□□□□□ -2.27
RTCAO00442 SNORA18.4-201ENST00000516440 124 ntBASIC0.87□□□□□ -2.27
RTCAO00442 MIR2115-201ENST00000516657 100 ntBASIC0.87□□□□□ -2.27
RTCAO00442 AP003484.1-201ENST00000530974 250 ntBASIC0.87□□□□□ -2.27
RTCAO00442 AC004817.2-201ENST00000561794 651 ntBASIC0.87□□□□□ -2.27
RTCAO00442 AC106800.4-201ENST00000614905 153 ntBASIC0.87□□□□□ -2.27
RTCAO00442 7SK.10-201ENST00000621414 298 ntBASIC0.87□□□□□ -2.27
RTCAO00442 MIR6516-201ENST00000630554 81 ntBASIC0.87□□□□□ -2.27
RTCAO00442 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
RTCAO00442 Y_RNA.91-201ENST00000363042 107 ntBASIC0.86□□□□□ -2.27
RTCAO00442 RNU6-580P-201ENST00000365159 107 ntBASIC0.86□□□□□ -2.27
RTCAO00442 RNU6-728P-201ENST00000365375 104 ntBASIC0.86□□□□□ -2.27
RTCAO00442 Y_RNA.542-201ENST00000384641 111 ntBASIC0.86□□□□□ -2.27
RTCAO00442 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
RTCAO00442 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
RTCAO00442 MIR4698-201ENST00000577795 80 ntBASIC0.86□□□□□ -2.27
RTCAO00442 MIR548AO-201ENST00000579992 96 ntBASIC0.86□□□□□ -2.27
RTCAO00442 MIR4744-201ENST00000581563 82 ntBASIC0.86□□□□□ -2.27
RTCAO00442 AC131055.1-201ENST00000584626 316 ntBASIC0.86□□□□□ -2.27
RTCAO00442 MIR3149-201ENST00000584629 83 ntBASIC0.86□□□□□ -2.27
RTCAO00442 MIR6767-201ENST00000637302 66 ntBASIC0.86□□□□□ -2.27
RTCAO00442 Y_RNA.241-201ENST00000364470 117 ntBASIC0.85□□□□□ -2.27
RTCAO00442 RNU6-396P-201ENST00000365369 105 ntBASIC0.85□□□□□ -2.27
RTCAO00442 RNU6-1292P-201ENST00000383856 107 ntBASIC0.85□□□□□ -2.27
RTCAO00442 Y_RNA.435-201ENST00000384095 112 ntBASIC0.85□□□□□ -2.27
RTCAO00442 MIR570-201ENST00000384917 97 ntBASIC0.85□□□□□ -2.27
RTCAO00442 SNORD111-201ENST00000408139 94 ntBASIC0.85□□□□□ -2.27
RTCAO00442 Y_RNA.626-201ENST00000411288 95 ntBASIC0.85□□□□□ -2.27
RTCAO00442 AC006461.1-201ENST00000412637 326 ntBASIC0.85□□□□□ -2.27
RTCAO00442 RNA5SP102-201ENST00000516865 106 ntBASIC0.85□□□□□ -2.27
RTCAO00442 AC036111.3-201ENST00000526389 112 ntBASIC0.85□□□□□ -2.27
RTCAO00442 MIR3973-201ENST00000579824 107 ntBASIC0.85□□□□□ -2.27
RTCAO00442 MIR3128-201ENST00000581957 66 ntBASIC0.85□□□□□ -2.27
RTCAO00442 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
RTCAO00442 Y_RNA.7-201ENST00000362352 102 ntBASIC0.84□□□□□ -2.27
RTCAO00442 Y_RNA.144-201ENST00000363521 113 ntBASIC0.84□□□□□ -2.27
RTCAO00442 Y_RNA.168-201ENST00000363740 102 ntBASIC0.84□□□□□ -2.27
RTCAO00442 SNORD27-201ENST00000363981 72 ntBASIC0.84□□□□□ -2.27
RTCAO00442 Y_RNA.269-201ENST00000364685 89 ntBASIC0.84□□□□□ -2.27
RTCAO00442 SNORA27-201ENST00000384323 126 ntBASIC0.84□□□□□ -2.27
RTCAO00442 Y_RNA.494-201ENST00000384432 111 ntBASIC0.84□□□□□ -2.27
RTCAO00442 RNU6-110P-201ENST00000384508 104 ntBASIC0.84□□□□□ -2.27
RTCAO00442 AF228730.3-201ENST00000436691 102 ntBASIC0.84□□□□□ -2.27
RTCAO00442 RNU7-96P-201ENST00000459535 64 ntBASIC0.84□□□□□ -2.27
RTCAO00442 RPS29P24-201ENST00000486345 171 ntBASIC0.84□□□□□ -2.27
RTCAO00442 Y_RNA.680-201ENST00000516441 93 ntBASIC0.84□□□□□ -2.27
RTCAO00442 MIR4781-201ENST00000585250 76 ntBASIC0.84□□□□□ -2.27
RTCAO00442 AL365205.2-201ENST00000594586 68 ntBASIC0.84□□□□□ -2.27
RTCAO00442 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.83□□□□□ -2.28
RTCAO00442 Y_RNA.199-201ENST00000364014 102 ntBASIC0.83□□□□□ -2.28
RTCAO00442 SNORD113.3-201ENST00000364630 78 ntBASIC0.83□□□□□ -2.28
RTCAO00442 RNU6-1189P-201ENST00000383958 107 ntBASIC0.83□□□□□ -2.28
RTCAO00442 Y_RNA.440-201ENST00000384120 114 ntBASIC0.83□□□□□ -2.28
RTCAO00442 Y_RNA.447-201ENST00000384184 113 ntBASIC0.83□□□□□ -2.28
RTCAO00442 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
RTCAO00442 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
RTCAO00442 MIR100-201ENST00000385259 80 ntBASIC0.83□□□□□ -2.28
RTCAO00442 RNU6-578P-201ENST00000390980 103 ntBASIC0.83□□□□□ -2.28
RTCAO00442 Y_RNA.622-201ENST00000411091 108 ntBASIC0.83□□□□□ -2.28
RTCAO00442 Y_RNA.673-201ENST00000516306 88 ntBASIC0.83□□□□□ -2.28
RTCAO00442 RNU7-53P-201ENST00000516705 60 ntBASIC0.83□□□□□ -2.28
RTCAO00442 RNU6-1270P-201ENST00000517128 108 ntBASIC0.83□□□□□ -2.28
RTCAO00442 MIR8055-201ENST00000610739 97 ntBASIC0.83□□□□□ -2.28
RTCAO00442 Z97988.1-201ENST00000637697 135 ntBASIC0.83□□□□□ -2.28
RTCAO00442 Y_RNA.23-201ENST00000362496 106 ntBASIC0.82□□□□□ -2.28
RTCAO00442 SNORD77.3-201ENST00000391113 65 ntBASIC0.82□□□□□ -2.28
RTCAO00442 SNORA79-201ENST00000408376 140 ntBASIC0.82□□□□□ -2.28
RTCAO00442 RNU6-998P-201ENST00000515894 101 ntBASIC0.82□□□□□ -2.28
RTCAO00442 SNORD36C-201ENST00000516733 66 ntBASIC0.82□□□□□ -2.28
RTCAO00442 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.82□□□□□ -2.28
RTCAO00442 MIR4264-201ENST00000583520 66 ntBASIC0.82□□□□□ -2.28
RTCAO00442 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
RTCAO00442 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
RTCAO00442 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
RTCAO00442 Y_RNA.60-201ENST00000362831 98 ntBASIC0.81□□□□□ -2.28
RTCAO00442 Y_RNA.238-201ENST00000364441 102 ntBASIC0.81□□□□□ -2.28
RTCAO00442 SNORA20.1-201ENST00000364790 130 ntBASIC0.81□□□□□ -2.28
RTCAO00442 Y_RNA.330-201ENST00000365230 109 ntBASIC0.81□□□□□ -2.28
RTCAO00442 MT-TG-201ENST00000387429 68 ntBASIC0.81□□□□□ -2.28
RTCAO00442 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms