Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 AC133485.4-201ENST00000561835 220 ntBASIC0.07□□□□□ -2.4
TNFRSF11BO00300 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.07□□□□□ -2.4
TNFRSF11BO00300 MIR5692C2-201ENST00000577959 77 ntBASIC0.07□□□□□ -2.4
TNFRSF11BO00300 MIR4724-201ENST00000579485 89 ntBASIC0.07□□□□□ -2.4
TNFRSF11BO00300 SNORD114-26-201ENST00000363543 72 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.205-201ENST00000364128 113 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 RNU6-716P-201ENST00000365621 103 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 SNORD61-201ENST00000384252 73 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.505-201ENST00000384489 102 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 RNU6-397P-201ENST00000516226 104 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 AC069113.3-201ENST00000521019 150 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 AC100767.1-201ENST00000528178 123 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 MIR4662B-201ENST00000579498 81 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 MIR376A1-201ENST00000616574 68 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 AC007485.1-201ENST00000616755 206 ntBASIC0.06□□□□□ -2.4
TNFRSF11BO00300 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.06□□□□□ -2.4
TNFRSF11BO00300 MIR30D-201ENST00000362283 70 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.7-201ENST00000362352 102 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.58-201ENST00000362807 102 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 SNORA72.1-201ENST00000363485 129 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.154-201ENST00000363624 102 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 RNY3P1-201ENST00000365085 102 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.315-201ENST00000365117 102 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.424-201ENST00000384063 103 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 MIR548A2-201ENST00000384956 97 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 MIR563-201ENST00000385080 79 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 AL358176.2-201ENST00000425769 204 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 RNU2-11P-201ENST00000459191 187 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 FGF7P4-201ENST00000509595 295 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 MTCO2P24-201ENST00000515611 426 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 RNU6-1270P-201ENST00000517128 108 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 MIR8087-201ENST00000612745 78 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 AC112487.2-201ENST00000637950 304 ntBASIC0.05□□□□□ -2.4
TNFRSF11BO00300 MIR330-201ENST00000362196 94 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 RNU4-90P-201ENST00000362773 141 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.356-201ENST00000365475 113 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 SNORD24-201ENST00000383884 75 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.466-201ENST00000384294 113 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.529-201ENST00000384586 119 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MT-TF-201ENST00000387314 71 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MIR1302-11-201ENST00000408051 138 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MIR1302-9-201ENST00000408365 138 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MIR1302-10-201ENST00000408734 138 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.639-201ENST00000458981 102 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 RNU2-31P-201ENST00000516954 155 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.715-201ENST00000517082 110 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 RNU6-365P-201ENST00000517113 106 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MIR1302-2-201ENST00000607096 138 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MIR4315-1-201ENST00000636800 73 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 MIR4315-2-201ENST00000640925 73 ntBASIC0.04□□□□□ -2.4
TNFRSF11BO00300 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.03□□□□□ -2.4
TNFRSF11BO00300 MIR342-201ENST00000362212 99 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 RNU6-1272P-201ENST00000362776 107 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 SNORA36.1-201ENST00000363424 132 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.445-201ENST00000384168 102 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.476-201ENST00000384347 108 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 MIR644A-201ENST00000385262 94 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.579-201ENST00000390939 94 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 SNORD115-46-201ENST00000390982 71 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 SNORD77.3-201ENST00000391113 65 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 MIR548I3-201ENST00000408378 149 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 SNORD93-201ENST00000408813 74 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 MIR1197-201ENST00000408818 88 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 PMCHL1-202ENST00000423102 261 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 RNU6-863P-201ENST00000515989 104 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 RNU6-475P-201ENST00000516073 104 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 AP003327.1-201ENST00000529684 127 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.03□□□□□ -2.4
TNFRSF11BO00300 AC112693.2-201ENST00000556538 232 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 MIR6779-201ENST00000617283 64 ntBASIC0.03□□□□□ -2.4
TNFRSF11BO00300 Y_RNA.197-201ENST00000364004 102 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU4-10P-201ENST00000364383 140 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU6-740P-201ENST00000364734 105 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU4-83P-201ENST00000410863 133 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 Y_RNA.617-201ENST00000410920 90 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 AF228730.3-201ENST00000436691 102 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU7-96P-201ENST00000459535 64 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU6-998P-201ENST00000515894 101 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU6-507P-201ENST00000516045 100 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU6-875P-201ENST00000516488 106 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
TNFRSF11BO00300 AC124312.5-201ENST00000604451 268 ntBASIC0.02□□□□□ -2.41
TNFRSF11BO00300 RNU6-888P-201ENST00000363010 101 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 Y_RNA.183-201ENST00000363882 113 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 RNU6-662P-201ENST00000384253 104 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 MIR7-2-201ENST00000384970 110 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 RNU2-59P-201ENST00000410482 191 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.01□□□□□ -2.41
TNFRSF11BO00300 RNU6-469P-201ENST00000516253 101 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 RNU6-504P-201ENST00000516568 104 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 RNU6-897P-201ENST00000517135 105 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.01□□□□□ -2.41
TNFRSF11BO00300 AC090574.1-201ENST00000623186 233 ntBASIC0.01□□□□□ -2.41
TNFRSF11BO00300 RNU6-1283P-201ENST00000365314 105 ntBASIC0□□□□□ -2.41
TNFRSF11BO00300 Y_RNA.394-201ENST00000383942 103 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms