Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MIR548AX-201ENST00000580117 73 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 MIR548AE1-201ENST00000583292 70 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 AC027449.1-201ENST00000608890 407 ntBASIC-1.32□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD114-15-201ENST00000364687 72 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.323-201ENST00000365157 109 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-449P-201ENST00000383914 107 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-20P-201ENST00000384106 107 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.440-201ENST00000384120 114 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNY3P10-201ENST00000384764 102 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 MTND2P39-201ENST00000457230 764 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.665-201ENST00000516177 98 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-311P-201ENST00000516224 102 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 MIR3179-1-201ENST00000578940 84 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 MIR3179-2-201ENST00000579107 84 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 MIR3179-3-201ENST00000579566 84 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 MIR3179-4-201ENST00000617599 84 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 AC069503.3-201ENST00000618674 145 ntBASIC-1.33□□□□□ -2.62
TCRBV3S1A0A5B6 RNU6-626P-201ENST00000363354 107 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 SNORD116-11-201ENST00000383882 92 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 SNORA18-201ENST00000384416 132 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 RNU7-55P-201ENST00000459426 62 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 AP000676.1-201ENST00000533307 52 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 YWHAEP2-201ENST00000580066 112 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 MIR4499-201ENST00000584834 69 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 MIR6841-201ENST00000637129 72 ntBASIC-1.34□□□□□ -2.62
TCRBV3S1A0A5B6 MIR342-201ENST00000362212 99 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.373-201ENST00000365600 103 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 SNORD61-201ENST00000384252 73 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 MIR518B-201ENST00000385127 83 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 RNU5E-9P-201ENST00000411164 104 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 AC093423.1-201ENST00000440817 142 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 MIR548H5-201ENST00000580314 60 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 DISC2.1-201ENST00000612827 205 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 U6.109-201ENST00000636749 87 ntBASIC-1.35□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-553P-201ENST00000364047 96 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 RNY1P2-201ENST00000364820 117 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 RNY3P5-201ENST00000384127 102 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-35P-201ENST00000384530 107 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 MIR599-201ENST00000385069 95 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 AF228730.3-201ENST00000436691 102 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 RNU7-141P-201ENST00000459304 62 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 SCARNA1-201ENST00000517138 166 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 MIR4324-201ENST00000584846 72 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 AC005357.1-201ENST00000588399 301 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 uc_338.19-201ENST00000616808 99 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 MIR6738-201ENST00000619620 64 ntBASIC-1.36□□□□□ -2.63
TCRBV3S1A0A5B6 MIR302B-201ENST00000362188 73 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 SNORD24-201ENST00000383884 75 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-154P-201ENST00000384306 106 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.615-201ENST00000410769 117 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 RNU2-14P-201ENST00000411053 191 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 AC023449.1-201ENST00000454464 154 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 snoU13.13-201ENST00000458842 104 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-1129P-201ENST00000515964 104 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 MTATP6P24-201ENST00000576835 677 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 AL021707.8-201ENST00000609428 183 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 AC145423.2-201ENST00000610631 239 ntBASIC-1.37□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 RNU4-28P-201ENST00000364739 141 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 SNORD5.1-201ENST00000458800 75 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 RNU7-74P-201ENST00000459104 62 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 RNU7-79P-201ENST00000516082 62 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 SNORD22.1-201ENST00000516331 125 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-759P-201ENST00000516740 103 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 MTND5P40-201ENST00000559945 246 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 AC011603.4-201ENST00000611325 277 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 MIR7111-201ENST00000619751 72 ntBASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-1.38□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-888P-201ENST00000363010 101 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 MIR517B-201ENST00000385102 67 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 MT-TY-201ENST00000387409 66 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 AL160004.2-201ENST00000432935 350 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-274P-201ENST00000459566 107 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 TRAJ51-201ENST00000504127 63 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 MIR2355-201ENST00000517199 87 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 DEFB117-201ENST00000602356 141 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 AF246928.1-201ENST00000623768 87 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 AC079248.2-201ENST00000623779 326 ntBASIC-1.39□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.169-201ENST00000363745 96 ntBASIC-1.4□□□□□ -2.63
TCRBV3S1A0A5B6 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.4□□□□□ -2.63
TCRBV3S1A0A5B6 RNU7-125P-201ENST00000458760 62 ntBASIC-1.4□□□□□ -2.63
TCRBV3S1A0A5B6 AC022137.1-201ENST00000483735 151 ntBASIC-1.4□□□□□ -2.63
TCRBV3S1A0A5B6 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.4□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms