Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 AL117187.1-201ENST00000555482 181 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.812-201ENST00000610788 101 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.784-201ENST00000613803 101 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.787-201ENST00000616522 101 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.780-201ENST00000617336 101 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.801-201ENST00000619005 101 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 MIR6513-201ENST00000621188 64 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 7SK.10-201ENST00000621414 298 ntBASIC0.52□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.23-201ENST00000362496 106 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-653P-201ENST00000363074 106 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-28-201ENST00000363931 81 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 RNU1-36P-201ENST00000365130 165 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 RNY1P8-201ENST00000383970 114 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.459-201ENST00000384251 102 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 MIR608-201ENST00000384820 100 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 AL606845.1-201ENST00000404881 255 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 MIR1302-6-201ENST00000408466 90 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 SNORD99-201ENST00000408612 74 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 RPS26P5-201ENST00000418544 335 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 AL358176.2-201ENST00000425769 204 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 RNU7-45P-201ENST00000459460 63 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 PSMC1P5-201ENST00000512850 177 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 MIR4282-201ENST00000583613 67 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 AC006504.6-201ENST00000590142 199 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.51□□□□□ -2.33
TRAV40A0A0B4J280 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 RNA5SP347-201ENST00000362445 119 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.54-201ENST00000362766 105 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.82-201ENST00000363000 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.92-201ENST00000363043 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.235-201ENST00000364412 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 SNORD113.3-201ENST00000364630 78 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.634-201ENST00000364811 113 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.306-201ENST00000365015 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.312-201ENST00000365089 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.322-201ENST00000365151 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 SNORA24-201ENST00000384096 131 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.477-201ENST00000384352 108 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 MIR200A-201ENST00000384875 90 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 MIR216A-201ENST00000385063 110 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-381P-201ENST00000391259 108 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-613P-201ENST00000410412 108 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-847P-201ENST00000411115 108 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.650-201ENST00000459002 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 RNU7-67P-201ENST00000459003 62 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 SCARNA15.1-201ENST00000516384 125 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.680-201ENST00000516441 93 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.777-201ENST00000516982 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 MIR4661-201ENST00000582720 75 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.771-201ENST00000598668 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 AL353765.1-201ENST00000605514 183 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.789-201ENST00000622480 102 ntBASIC0.5□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.36-201ENST00000362602 112 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-888P-201ENST00000363010 101 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.304-201ENST00000365011 112 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-597P-201ENST00000365620 102 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 MIR7-2-201ENST00000384970 110 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.590-201ENST00000410140 107 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 POLR2J4-204ENST00000418424 324 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 MTND2P23-201ENST00000422990 651 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 MTND4LP30-201ENST00000454092 297 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AC023449.1-201ENST00000454464 154 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 SNORD127-201ENST00000458892 86 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.679-201ENST00000516416 91 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-1007P-201ENST00000516586 107 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AP003484.1-201ENST00000530974 250 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AP000942.4-201ENST00000604811 241 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AC020891.4-201ENST00000605745 93 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 MIR8055-201ENST00000610739 97 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 MIR6740-201ENST00000618268 113 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AC012676.2-201ENST00000619258 186 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 AC134878.1-201ENST00000619901 243 ntBASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV40A0A0B4J280 HSBP1P2-201ENST00000299671 229 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 MIR335-201ENST00000362173 94 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 MIR342-201ENST00000362212 99 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.133-201ENST00000363428 110 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 SNORA63-201ENST00000363450 132 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.145-201ENST00000363527 102 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-396P-201ENST00000365369 105 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.422-201ENST00000384054 114 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-574P-201ENST00000384265 107 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.518-201ENST00000384552 113 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.539-201ENST00000384635 107 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 SNORD77.3-201ENST00000391113 65 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 SNORD111-201ENST00000408139 94 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-994P-201ENST00000410507 111 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 AL606490.4-201ENST00000423117 127 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 RNU11-2P-201ENST00000516898 142 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 RNU6-365P-201ENST00000517113 106 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 RN7SL793P-201ENST00000583259 296 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 AL442067.1-201ENST00000613261 223 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
TRAV40A0A0B4J280 Y_RNA.7-201ENST00000362352 102 ntBASIC0.47□□□□□ -2.33
TRAV40A0A0B4J280 SNORD115-34-201ENST00000362441 82 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms