Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 Y_RNA.376-201ENST00000365638 108 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR626-201ENST00000385032 94 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 SCARNA8-201ENST00000515924 131 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.666-201ENST00000516187 112 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 AC006006.1-201ENST00000603082 144 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 AC106800.4-201ENST00000614905 153 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 MTND1P7-201ENST00000632801 297 ntBASIC0.83□□□□□ -2.28
PCDHGA1Q9Y5H4 HSBP1P2-201ENST00000299671 229 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.44-201ENST00000362676 108 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.237-201ENST00000364439 102 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.486-201ENST00000384398 107 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORA8.3-201ENST00000384679 139 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR100-201ENST00000385259 80 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.587-201ENST00000391210 103 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD111-201ENST00000408139 94 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 AC006461.1-201ENST00000412637 326 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-126P-201ENST00000516685 103 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.720-201ENST00000517166 92 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR548AO-201ENST00000579992 96 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR4714-201ENST00000580728 77 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 AC006504.6-201ENST00000590142 199 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR6513-201ENST00000621188 64 ntBASIC0.82□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR335-201ENST00000362173 94 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.24-201ENST00000362508 103 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.117-201ENST00000363294 101 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD113.3-201ENST00000364630 78 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.512-201ENST00000384518 102 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-1160P-201ENST00000384546 104 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-713P-201ENST00000384761 107 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-613P-201ENST00000410412 108 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 AC067940.1-201ENST00000458411 300 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 AC007751.1-201ENST00000529260 376 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 AC243994.1-201ENST00000618627 109 ntBASIC0.81□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-654P-201ENST00000364373 107 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-740P-201ENST00000364734 105 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-396P-201ENST00000365369 105 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.572-201ENST00000384757 98 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR193B-201ENST00000384907 83 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 AC087499.4-201ENST00000448505 178 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 AC107297.1-201ENST00000459991 176 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 MTATP8P1-201ENST00000467115 207 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-635P-201ENST00000516651 102 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR2115-201ENST00000516657 100 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 AL442663.2-201ENST00000554385 511 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 AC133485.1-201ENST00000567176 124 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 AC138907.6-201ENST00000568401 126 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR8062-201ENST00000621515 85 ntBASIC0.8□□□□□ -2.28
PCDHGA1Q9Y5H4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.82-201ENST00000363000 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.92-201ENST00000363043 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-28-201ENST00000363931 81 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.229-201ENST00000364347 113 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.235-201ENST00000364412 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.306-201ENST00000365015 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.312-201ENST00000365089 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.322-201ENST00000365151 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORA24-201ENST00000384096 131 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR605-201ENST00000385078 83 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD2.1-201ENST00000458762 69 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.650-201ENST00000459002 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.777-201ENST00000516982 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.771-201ENST00000598668 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.789-201ENST00000622480 102 ntBASIC0.79□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-34-201ENST00000362441 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-12-201ENST00000362583 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-29-201ENST00000362834 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-9-201ENST00000362912 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-21-201ENST00000362963 81 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-14-201ENST00000363090 81 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-238P-201ENST00000363313 106 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-13-201ENST00000363358 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-41-201ENST00000363608 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-11-201ENST00000363616 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-5-201ENST00000363633 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-39-201ENST00000363694 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-4-201ENST00000363810 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-16-201ENST00000363887 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-6-201ENST00000363942 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-42-201ENST00000364273 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-15-201ENST00000364809 81 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-1-201ENST00000364961 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-26-201ENST00000365067 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-10-201ENST00000365073 81 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-43-201ENST00000365503 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD115-36-201ENST00000365629 82 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 SNORD24-201ENST00000383884 75 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 Y_RNA.494-201ENST00000384432 111 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 MIR1302-6-201ENST00000408466 90 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU2-55P-201ENST00000411146 174 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.78□□□□□ -2.28
PCDHGA1Q9Y5H4 RNU6-365P-201ENST00000517113 106 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms