Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 ELOCP20-201ENST00000422460 345 ntBASIC0.56□□□□□ -2.32
SHANK1Q9Y566 snoU13.2-201ENST00000459201 104 ntBASIC0.56□□□□□ -2.32
SHANK1Q9Y566 RNA5SP255-201ENST00000516370 107 ntBASIC0.56□□□□□ -2.32
SHANK1Q9Y566 RNU7-181P-201ENST00000517234 74 ntBASIC0.56□□□□□ -2.32
SHANK1Q9Y566 AC020661.2-201ENST00000560114 134 ntBASIC0.56□□□□□ -2.32
SHANK1Q9Y566 MIR4791-201ENST00000607666 84 ntBASIC0.56□□□□□ -2.32
SHANK1Q9Y566 RNA5SP264-201ENST00000363115 107 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU6-103P-201ENST00000363686 107 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU6-472P-201ENST00000384299 107 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 SNORD2.1-201ENST00000458762 69 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU7-21P-201ENST00000459430 62 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 SNORA27.4-201ENST00000516650 95 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 AC019288.1-201ENST00000557918 224 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 MIR4662B-201ENST00000579498 81 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 MIR4251-201ENST00000635819 61 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.26-201ENST00000362539 101 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 SNORD113.3-201ENST00000364630 78 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.634-201ENST00000364811 113 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU6-806P-201ENST00000365147 105 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU6-1138P-201ENST00000365359 106 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU6-484P-201ENST00000384016 107 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.590-201ENST00000410140 107 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 RNU6-602P-201ENST00000411155 105 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 AP003716.2-201ENST00000528260 108 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.55□□□□□ -2.32
SHANK1Q9Y566 MIR4636-201ENST00000582271 80 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 PRELID3BP2-201ENST00000605362 201 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.55□□□□□ -2.32
SHANK1Q9Y566 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.54□□□□□ -2.32
SHANK1Q9Y566 MIR103A2-201ENST00000362154 78 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 SNORA25.1-201ENST00000362326 128 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 RNU6-1048P-201ENST00000364054 107 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 RNU6-818P-201ENST00000364837 108 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 SNORA2A-201ENST00000383885 135 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 RNU6-738P-201ENST00000384531 106 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 AC063976.4-201ENST00000421971 163 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 RNU7-41P-201ENST00000515917 61 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 SNORA70.22-201ENST00000517160 124 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 MIR4661-201ENST00000582720 75 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 AL365205.2-201ENST00000594586 68 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 AC013244.2-201ENST00000603396 103 ntBASIC0.54□□□□□ -2.32
SHANK1Q9Y566 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.54□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.7-201ENST00000362352 102 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.14-201ENST00000362415 103 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU6-1205P-201ENST00000363625 106 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU6-1209P-201ENST00000363655 107 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.168-201ENST00000363740 102 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.217-201ENST00000364214 105 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.286-201ENST00000364813 102 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 SNORD50B-201ENST00000364995 70 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU1-36P-201ENST00000365130 165 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 SNORA8.3-201ENST00000384679 139 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 SNORD111-201ENST00000408139 94 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU6-847P-201ENST00000411115 108 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AC023449.1-201ENST00000454464 154 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.641-201ENST00000459414 105 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 MIR548AR-201ENST00000582191 57 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 MIR4653-201ENST00000585107 83 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AC008507.4-201ENST00000585464 127 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AC134026.1-201ENST00000623249 2239 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 Y_RNA.352-201ENST00000365439 102 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU6-1067P-201ENST00000384752 107 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.53□□□□□ -2.32
SHANK1Q9Y566 snoU13.16-201ENST00000459350 104 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU4-71P-201ENST00000516258 113 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 RNU6-197P-201ENST00000516680 100 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AC008737.2-201ENST00000599446 118 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AC243994.1-201ENST00000618627 109 ntBASIC0.53□□□□□ -2.32
SHANK1Q9Y566 AC008163.1-202ENST00000636004 2889 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.47-201ENST00000362697 108 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.64-201ENST00000362845 102 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 SNORA2.2-201ENST00000365473 135 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.422-201ENST00000384054 114 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 RNY3P5-201ENST00000384127 102 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 Y_RNA.483-201ENST00000384380 101 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 RNA5SP63-201ENST00000391225 112 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 SNORD99-201ENST00000408612 74 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.52□□□□□ -2.33
SHANK1Q9Y566 RNU6-327P-201ENST00000516270 127 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 MIR4778-201ENST00000577635 80 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 HSBP1P2-201ENST00000299671 229 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
SHANK1Q9Y566 SNORD28B-201ENST00000390993 75 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 AL603910.2-201ENST00000407268 136 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 Z95118.1-201ENST00000421372 247 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 AC100767.1-201ENST00000528178 123 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 U2.14-201ENST00000615943 113 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 MIR6740-201ENST00000618268 113 ntBASIC0.52□□□□□ -2.33
SHANK1Q9Y566 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.52□□□□□ -2.33
SHANK1Q9Y566 SNORD115-34-201ENST00000362441 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-12-201ENST00000362583 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-29-201ENST00000362834 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-9-201ENST00000362912 82 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-21-201ENST00000362963 81 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-14-201ENST00000363090 81 ntBASIC0.51□□□□□ -2.33
SHANK1Q9Y566 SNORD115-13-201ENST00000363358 82 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 180.4 ms