Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 SNORD115-15-201ENST00000364809 81 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-1-201ENST00000364961 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-26-201ENST00000365067 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-10-201ENST00000365073 81 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-43-201ENST00000365503 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-36-201ENST00000365629 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 RNU6-950P-201ENST00000384651 107 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 AL034345.1-201ENST00000407768 123 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 RNU6-998P-201ENST00000515894 101 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 SNORD115-40-201ENST00000606510 82 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 AL162726.3-218ENST00000636401 95 ntBASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
RTCBQ9Y3I0 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
RTCBQ9Y3I0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 SNORD73B-201ENST00000364394 72 ntBASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 RNU6-109P-201ENST00000516364 107 ntBASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 RNU6-184P-201ENST00000516514 107 ntBASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 RNU7-6P-201ENST00000516845 62 ntBASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 MIR219B-201ENST00000637023 88 ntBASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
RTCBQ9Y3I0 MIR302B-201ENST00000362188 73 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 RNU6-833P-201ENST00000363486 107 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 SNORA67.3-201ENST00000384366 140 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 MIR221-201ENST00000385135 110 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 HSPE1P9-201ENST00000440046 311 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 IGLV3-17-201ENST00000519099 244 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 AC141557.1-201ENST00000540982 400 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 AC024614.2-201ENST00000577584 372 ntBASIC2.89□□□□□ -1.95
RTCBQ9Y3I0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 RNU1-148P-201ENST00000384472 162 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 RNU11-3P-201ENST00000391111 133 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 U8.16-201ENST00000391279 133 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 MIR1267-201ENST00000408723 78 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 MIR1912-201ENST00000410389 80 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 SNORA19.1-201ENST00000410656 129 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 RNA5SP144-201ENST00000410846 116 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 RPL39P25-201ENST00000449384 154 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 RNU6-904P-201ENST00000516206 101 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 RNA5SP168-201ENST00000516642 112 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 AC090821.2-201ENST00000523552 176 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 MIR2052-201ENST00000636055 55 ntBASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RTCBQ9Y3I0 SNORA63D-201ENST00000364359 132 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 RNU6-49P-201ENST00000384256 107 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 Y_RNA.494-201ENST00000384432 111 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 AL022718.1-201ENST00000412004 84 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 RNU7-26P-201ENST00000458980 63 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 AC107297.1-201ENST00000459991 176 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 RNA5SP137-201ENST00000516833 135 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 RNU6-158P-201ENST00000517104 100 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 AC007336.1-201ENST00000576365 3828 ntBASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
RTCBQ9Y3I0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 Y_RNA.558-201ENST00000384685 113 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 MIR597-201ENST00000384968 97 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 RNU6-816P-201ENST00000390914 107 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 RNU6-1268P-201ENST00000391214 107 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 RNU6-1239P-201ENST00000391310 107 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 RNU7-181P-201ENST00000517234 74 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 AC021613.1-201ENST00000623880 111 ntBASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RTCBQ9Y3I0 AL023284.1-201ENST00000403956 276 ntBASIC2.85□□□□□ -1.95
RTCBQ9Y3I0 RNU7-12P-201ENST00000516030 62 ntBASIC2.85□□□□□ -1.95
RTCBQ9Y3I0 SNORA31.4-201ENST00000516049 129 ntBASIC2.85□□□□□ -1.95
RTCBQ9Y3I0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.85□□□□□ -1.95
RTCBQ9Y3I0 SNORA1.2-201ENST00000365189 134 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 MIR488-201ENST00000365739 83 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 Y_RNA.531-201ENST00000384589 121 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 MTATP8P2-201ENST00000435212 202 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 RNU2-11P-201ENST00000459191 187 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 RNU6-295P-201ENST00000516901 104 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 AC004812.1-201ENST00000540773 146 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.84□□□□□ -1.95
RTCBQ9Y3I0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 SNORA38-201ENST00000363946 132 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 Y_RNA.220-201ENST00000364244 109 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 SNORA4.2-201ENST00000365313 147 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 RNU6-1031P-201ENST00000384773 107 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 AL512326.2-201ENST00000426359 151 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 RPS23P4-201ENST00000487908 423 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 AC087741.2-201ENST00000619415 172 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 MIR6766-201ENST00000622641 72 ntBASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
RTCBQ9Y3I0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.82□□□□□ -1.96
RTCBQ9Y3I0 Y_RNA.93-201ENST00000363066 109 ntBASIC2.82□□□□□ -1.96
RTCBQ9Y3I0 RNU4-36P-201ENST00000364294 144 ntBASIC2.82□□□□□ -1.96
RTCBQ9Y3I0 MIR452-201ENST00000385020 85 ntBASIC2.82□□□□□ -1.96
RTCBQ9Y3I0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms