Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU6-602P-201ENST00000411155 105 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD71-201ENST00000411292 86 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 MTND5P20-201ENST00000448677 143 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 RNU7-185P-201ENST00000459215 60 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 MTND3P22-201ENST00000510932 243 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 MTCO2P24-201ENST00000515611 426 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-507P-201ENST00000516045 100 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 RNA5SP94-201ENST00000516917 108 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 AL512605.2-201ENST00000592972 256 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 RAC1P9-201ENST00000604990 392 ntBASIC0.2□□□□□ -2.38
KCNIP3Q9Y2W7 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD44.1-201ENST00000363202 61 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 SNORA1.1-201ENST00000364671 133 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-290P-201ENST00000365212 101 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 MIR526A2-201ENST00000390198 65 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-1319P-201ENST00000390855 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-747P-201ENST00000390928 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-679P-201ENST00000391003 106 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-241P-201ENST00000391148 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-447P-201ENST00000410293 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-355P-201ENST00000410427 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-791P-201ENST00000410467 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-705P-201ENST00000410601 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-860P-201ENST00000410860 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-785P-201ENST00000411324 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 HMGN1P33-201ENST00000432945 451 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-693P-201ENST00000516134 107 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-897P-201ENST00000517135 105 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 AC022523.2-201ENST00000561045 150 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 AL133255.1-201ENST00000606374 441 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 AC243829.6-201ENST00000612652 106 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 U6.90-201ENST00000614007 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 U6.70-201ENST00000620287 104 ntBASIC0.19□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-888P-201ENST00000363010 101 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 MT-TF-201ENST00000387314 71 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.645-201ENST00000391229 102 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 PMCHL1-202ENST00000423102 261 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 SNRPGP12-201ENST00000449481 213 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.631-201ENST00000459607 101 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD36C-201ENST00000516733 66 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.702-201ENST00000516843 96 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 MIR4431-201ENST00000579990 94 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 MIR5688-201ENST00000580619 83 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 uc_338.16-201ENST00000621804 95 ntBASIC0.18□□□□□ -2.38
KCNIP3Q9Y2W7 MIR337-201ENST00000362281 93 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 RNU4-73P-201ENST00000363164 141 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.293-201ENST00000364908 93 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD61-201ENST00000384252 73 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-823P-201ENST00000391042 103 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 RNU7-96P-201ENST00000459535 64 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 RNU7-156P-201ENST00000517214 74 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 MIR4795-201ENST00000584182 89 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 MIR6715A-201ENST00000615929 79 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 AC090971.5-201ENST00000621102 293 ntBASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.17□□□□□ -2.38
KCNIP3Q9Y2W7 MIR30D-201ENST00000362283 70 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 Y_RNA.105-201ENST00000363182 111 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD118-201ENST00000363593 134 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-326P-201ENST00000365480 107 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 SNORD42.2-201ENST00000365570 69 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 MIR548I3-201ENST00000408378 149 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 MIR1252-201ENST00000408861 65 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-121P-201ENST00000410525 99 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 AC082651.2-201ENST00000496833 166 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-998P-201ENST00000515894 101 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-365P-201ENST00000517113 106 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 RNU6-1270P-201ENST00000517128 108 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 AC100767.1-201ENST00000528178 123 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 AP003733.2-201ENST00000529409 171 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 AC243829.3-201ENST00000622177 108 ntBASIC0.16□□□□□ -2.38
KCNIP3Q9Y2W7 SNORA25.1-201ENST00000362326 128 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 RNU6-1309P-201ENST00000363305 108 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 Y_RNA.217-201ENST00000364214 105 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 SNORD77.3-201ENST00000391113 65 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 SNORA53-201ENST00000391141 249 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 Y_RNA.641-201ENST00000459414 105 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 RNU6-448P-201ENST00000517052 107 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 AC104984.5-201ENST00000586878 94 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 AC037487.3-201ENST00000606668 112 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 SNORA25.18-201ENST00000607153 114 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 AL008718.3-201ENST00000610217 321 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 Y_RNA.802-201ENST00000614892 130 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 AC078938.1-201ENST00000620993 318 ntBASIC0.15□□□□□ -2.39
KCNIP3Q9Y2W7 RNU6-349P-201ENST00000362402 107 ntBASIC0.14□□□□□ -2.39
KCNIP3Q9Y2W7 Y_RNA.66-201ENST00000362862 102 ntBASIC0.14□□□□□ -2.39
KCNIP3Q9Y2W7 RNU6-514P-201ENST00000384208 107 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms