Protein–RNA interactions for Protein: Q9Y228

TRAF3IP3, TRAF3-interacting JNK-activating modulator, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3Q9Y228 SNORA22B-201ENST00000383876 138 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.389-201ENST00000383924 113 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 RNU6-662P-201ENST00000384253 104 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 MIR573-201ENST00000384964 99 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.676-201ENST00000516393 96 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 SNORA18.4-201ENST00000516440 124 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 SNORA27.4-201ENST00000516650 95 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 RNU2-31P-201ENST00000516954 155 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.711-201ENST00000516993 102 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.721-201ENST00000517207 102 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 AP000942.4-201ENST00000604811 241 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 AC020891.4-201ENST00000605745 93 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 AL160413.1-201ENST00000622780 310 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 snoU18.1-201ENST00000629629 71 ntBASIC0.43□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.138-201ENST00000363462 102 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 SNORD115-28-201ENST00000363931 81 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 RNU6-934P-201ENST00000365154 107 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 MIR526A2-201ENST00000390198 65 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 RNU6-101P-201ENST00000410323 104 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 RNA5SP247-201ENST00000411181 105 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 AC087499.4-201ENST00000448505 178 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 RNU7-73P-201ENST00000458743 63 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.631-201ENST00000459607 101 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 MIR4804-201ENST00000581683 73 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 AL355297.3-201ENST00000604082 446 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 MIR6740-201ENST00000618268 113 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 Z97988.1-201ENST00000637697 135 ntBASIC0.42□□□□□ -2.34
TRAF3IP3Q9Y228 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 UBE2WP1-201ENST00000362030 340 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.16-201ENST00000362421 102 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.37-201ENST00000362606 108 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.226-201ENST00000364337 114 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 RNU4-10P-201ENST00000364383 140 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 SNORD61-201ENST00000384252 73 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 SNORA40.5-201ENST00000391061 128 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 RNA5SP222-201ENST00000411039 105 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 AC022028.1-201ENST00000412054 408 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 RNU7-56P-201ENST00000458744 62 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 MIR4724-201ENST00000579485 89 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 AC113195.1-201ENST00000579952 141 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 AP000753.3-201ENST00000604083 169 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 AC134878.1-201ENST00000619901 243 ntBASIC0.41□□□□□ -2.34
TRAF3IP3Q9Y228 Y_RNA.19-201ENST00000362462 99 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.66-201ENST00000362862 102 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.128-201ENST00000363391 112 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.158-201ENST00000363651 101 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.241-201ENST00000364470 117 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 SNORD24-201ENST00000383884 75 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.572-201ENST00000384757 98 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 AC023449.1-201ENST00000454464 154 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 SNORD36C-201ENST00000516733 66 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-958P-201ENST00000516995 106 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 AC131281.1-201ENST00000522984 164 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 MIR5688-201ENST00000580619 83 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 MIR4676-201ENST00000583078 72 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 AC134503.1-201ENST00000633048 54 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 MIR5087-201ENST00000635826 76 ntBASIC0.4□□□□□ -2.35
TRAF3IP3Q9Y228 MIR367-201ENST00000362299 68 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 MIR18A-201ENST00000362310 71 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.14-201ENST00000362415 103 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.64-201ENST00000362845 102 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-888P-201ENST00000363010 101 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.153-201ENST00000363615 91 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.455-201ENST00000384230 98 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 MIR520H-201ENST00000385126 88 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 RNU7-67P-201ENST00000459003 62 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-1137P-201ENST00000517073 99 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-988P-201ENST00000519081 107 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 MIR4771-2-201ENST00000577758 74 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 MIR4711-201ENST00000578274 70 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 MIR4662B-201ENST00000579498 81 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 MIR4771-1-201ENST00000582617 74 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 AC243829.3-201ENST00000622177 108 ntBASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.39□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.84-201ENST00000363011 104 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.216-201ENST00000364205 93 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.293-201ENST00000364908 93 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 Y_RNA.535-201ENST00000384612 99 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 MIR520F-201ENST00000384824 87 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 MIR140-201ENST00000385282 100 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 RNA5SP193-201ENST00000410353 107 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 HMGN1P33-201ENST00000432945 451 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 MTND4LP30-201ENST00000454092 297 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 RNU7-62P-201ENST00000458856 62 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 AC107297.1-201ENST00000459991 176 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 RNU6-693P-201ENST00000516134 107 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 AC020661.2-201ENST00000560114 134 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 MIR4680-201ENST00000580906 66 ntBASIC0.38□□□□□ -2.35
TRAF3IP3Q9Y228 SNORA25.1-201ENST00000362326 128 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms