Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 SNX2P2-201ENST00000424553 323 ntBASIC2.17□□□□□ -2.06
CDK11AQ9UQ88 SNRPGP13-201ENST00000442212 177 ntBASIC2.17□□□□□ -2.06
CDK11AQ9UQ88 AC097639.2-201ENST00000603159 172 ntBASIC2.17□□□□□ -2.06
CDK11AQ9UQ88 MIR6078-201ENST00000611069 100 ntBASIC2.17□□□□□ -2.06
CDK11AQ9UQ88 FTX_2.1-201ENST00000618816 94 ntBASIC2.17□□□□□ -2.06
CDK11AQ9UQ88 Y_RNA.191-201ENST00000363972 113 ntBASIC2.16□□□□□ -2.06
CDK11AQ9UQ88 SNORD24-201ENST00000383884 75 ntBASIC2.16□□□□□ -2.06
CDK11AQ9UQ88 SNORD26-201ENST00000384147 75 ntBASIC2.16□□□□□ -2.06
CDK11AQ9UQ88 AC090142.3-201ENST00000519012 385 ntBASIC2.16□□□□□ -2.06
CDK11AQ9UQ88 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 MIR548O-201ENST00000408583 114 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 snoU13.18-201ENST00000459483 104 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 AC023790.1-201ENST00000482174 347 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 AC107027.2-201ENST00000512197 115 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.666-201ENST00000516187 112 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 RNU6-830P-201ENST00000516353 107 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 AC090049.2-201ENST00000550377 109 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 FAM106DP-201ENST00000586416 501 ntBASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.15□□□□□ -2.07
CDK11AQ9UQ88 MIR489-201ENST00000384923 84 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 AL451046.2-201ENST00000403074 277 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 RPL30P7-201ENST00000479312 323 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 RNU6-693P-201ENST00000516134 107 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 SNORD116-25-201ENST00000516517 92 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 MIR378D2-201ENST00000580636 98 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 AL513534.2-201ENST00000603836 250 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 AC015726.2-201ENST00000620112 122 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 AC091895.1-201ENST00000624494 256 ntBASIC2.14□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.91-201ENST00000363042 107 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.555-201ENST00000384673 110 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 MIR526A1-201ENST00000384897 85 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 MIR516B2-201ENST00000385190 85 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 MIR653-201ENST00000385279 96 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 AC006461.1-201ENST00000412637 326 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 MIR4452-201ENST00000583004 71 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 SNORA4-201ENST00000584302 138 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 MIR3660-201ENST00000584845 100 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 AL365434.2-201ENST00000607979 234 ntBASIC2.13□□□□□ -2.07
CDK11AQ9UQ88 MIR26B-201ENST00000362251 77 ntBASIC2.12□□□□□ -2.07
CDK11AQ9UQ88 RNU6-888P-201ENST00000363010 101 ntBASIC2.12□□□□□ -2.07
CDK11AQ9UQ88 SEPT7P4-201ENST00000437076 306 ntBASIC2.12□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.66-201ENST00000362862 102 ntBASIC2.11□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.337-201ENST00000365312 102 ntBASIC2.11□□□□□ -2.07
CDK11AQ9UQ88 MIR320A-201ENST00000385302 82 ntBASIC2.11□□□□□ -2.07
CDK11AQ9UQ88 RNU6-955P-201ENST00000410497 104 ntBASIC2.11□□□□□ -2.07
CDK11AQ9UQ88 AC092991.1-201ENST00000477176 376 ntBASIC2.11□□□□□ -2.07
CDK11AQ9UQ88 RNU6-917P-201ENST00000516294 104 ntBASIC2.11□□□□□ -2.07
CDK11AQ9UQ88 AL442644.1-201ENST00000454390 3105 ntBASIC2.1□□□□□ -2.07
CDK11AQ9UQ88 SNORD61-201ENST00000384252 73 ntBASIC2.1□□□□□ -2.07
CDK11AQ9UQ88 RNU6-886P-201ENST00000384319 105 ntBASIC2.1□□□□□ -2.07
CDK11AQ9UQ88 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.1□□□□□ -2.07
CDK11AQ9UQ88 RNU7-25P-201ENST00000516544 62 ntBASIC2.1□□□□□ -2.07
CDK11AQ9UQ88 AL357312.1-201ENST00000603879 298 ntBASIC2.1□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.150-201ENST00000363562 102 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 SNORD115-28-201ENST00000363931 81 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 SNORA1.2-201ENST00000365189 134 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.441-201ENST00000384123 112 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.521-201ENST00000384560 114 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 Y_RNA.547-201ENST00000384654 119 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 RNU6-239P-201ENST00000390990 99 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 RNU6-1270P-201ENST00000517128 108 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 AC134878.1-201ENST00000619901 243 ntBASIC2.09□□□□□ -2.07
CDK11AQ9UQ88 RNU4-84P-201ENST00000364200 139 ntBASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 SNORA40.6-201ENST00000391153 128 ntBASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 RNU6-1135P-201ENST00000411083 103 ntBASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 AC087499.4-201ENST00000448505 178 ntBASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 AC004223.1-201ENST00000479840 271 ntBASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 AL512310.8-201ENST00000550183 120 ntBASIC2.08□□□□□ -2.08
CDK11AQ9UQ88 Y_RNA.542-201ENST00000384641 111 ntBASIC2.07□□□□□ -2.08
CDK11AQ9UQ88 RNU6-1067P-201ENST00000384752 107 ntBASIC2.07□□□□□ -2.08
CDK11AQ9UQ88 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.07□□□□□ -2.08
CDK11AQ9UQ88 SNORA18.7-201ENST00000516910 131 ntBASIC2.07□□□□□ -2.08
CDK11AQ9UQ88 GHRLOS.1-201ENST00000610995 70 ntBASIC2.07□□□□□ -2.08
CDK11AQ9UQ88 SNORA25.7-201ENST00000364375 127 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 MIR518F-201ENST00000384973 87 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 U8.17-201ENST00000391292 132 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 SNORD123-201ENST00000459473 70 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 RNU6-922P-201ENST00000516753 99 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 SNORA74.3-201ENST00000517108 154 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 AC019288.1-201ENST00000557918 224 ntBASIC2.06□□□□□ -2.08
CDK11AQ9UQ88 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 Y_RNA.180-201ENST00000363867 113 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 RNU6-978P-201ENST00000364371 103 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 Y_RNA.410-201ENST00000383992 113 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 MIR548A2-201ENST00000384956 97 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 AC074198.2-201ENST00000508153 258 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 RNU4-57P-201ENST00000515980 135 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 RNU7-43P-201ENST00000516554 64 ntBASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.05□□□□□ -2.08
CDK11AQ9UQ88 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 Y_RNA.272-201ENST00000364696 102 ntBASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 SNORD114-22-201ENST00000365423 72 ntBASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 RNU6-597P-201ENST00000365620 102 ntBASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 RNU5E-9P-201ENST00000411164 104 ntBASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 AC107297.1-201ENST00000459991 176 ntBASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 CYP3A52P-201ENST00000563326 91 ntBASIC2.04□□□□□ -2.08
CDK11AQ9UQ88 AL365205.2-201ENST00000594586 68 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms