Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 Y_RNA.507-201ENST00000384500 99 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 RNU6-950P-201ENST00000384651 107 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 RNU6-1031P-201ENST00000384773 107 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 RNU7-26P-201ENST00000458980 63 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 RN7SKP12-201ENST00000516275 143 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 FO624990.1-201ENST00000636373 85 ntBASIC2.59□□□□□ -1.99
AP4E1Q9UPM8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.59□□□□□ -2
AP4E1Q9UPM8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
AP4E1Q9UPM8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
AP4E1Q9UPM8 RNU6-363P-201ENST00000362895 105 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 Y_RNA.171-201ENST00000363760 102 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 Y_RNA.360-201ENST00000365512 102 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 MIR516B2-201ENST00000385190 85 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 MIR577-201ENST00000385196 96 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 Y_RNA.601-201ENST00000410500 113 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 SNORA31.15-201ENST00000516771 132 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 MIR4446-201ENST00000578505 67 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 MIR6852-201ENST00000621699 66 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 AC064859.1-201ENST00000624741 174 ntBASIC2.58□□□□□ -2
AP4E1Q9UPM8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
AP4E1Q9UPM8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.58□□□□□ -2
AP4E1Q9UPM8 RNU4-67P-201ENST00000364569 141 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 SNORA24-201ENST00000384096 131 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 MIR452-201ENST00000385020 85 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU6-1319P-201ENST00000390855 104 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU6-747P-201ENST00000390928 104 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU6-241P-201ENST00000391148 104 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU6-177P-201ENST00000411257 104 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU6-893P-201ENST00000458841 100 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 MIR1270-201ENST00000459320 83 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU2-13P-201ENST00000515909 113 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNU7-12P-201ENST00000516030 62 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 RNVU1-2-201ENST00000516326 135 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 MIR6817-201ENST00000615588 66 ntBASIC2.57□□□□□ -2
AP4E1Q9UPM8 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
AP4E1Q9UPM8 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP4E1Q9UPM8 SNORD115-2-201ENST00000362842 82 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 RNA5SP68-201ENST00000363885 119 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 RNA5SP173-201ENST00000364857 136 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 Y_RNA.290-201ENST00000364879 114 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 SNORD115-20-201ENST00000365099 82 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 DEFA7P-201ENST00000382676 285 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 RNU11-3P-201ENST00000391111 133 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 SNORA26.6-201ENST00000391256 115 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 RNU6-733P-201ENST00000410759 104 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 AC096949.1-201ENST00000412047 152 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 UBE2DNL-203ENST00000474922 222 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 UBL5P3-201ENST00000475112 231 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 RNA5SP437-201ENST00000517249 129 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 AC026421.1-201ENST00000519101 163 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
AP4E1Q9UPM8 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
AP4E1Q9UPM8 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP4E1Q9UPM8 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
AP4E1Q9UPM8 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
AP4E1Q9UPM8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
AP4E1Q9UPM8 RNU6-832P-201ENST00000363319 107 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 Y_RNA.155-201ENST00000363632 101 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 Y_RNA.299-201ENST00000364973 94 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 SNORA1.2-201ENST00000365189 134 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 Y_RNA.470-201ENST00000384307 117 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 Y_RNA.510-201ENST00000384511 114 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 MIR450A2-201ENST00000385022 100 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 RNA5SP465-201ENST00000391195 109 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 RNU4-69P-201ENST00000410677 143 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 RN7SKP192-201ENST00000411291 327 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 HMGN2P3-201ENST00000433603 273 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 HMGN2P5-201ENST00000436882 273 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 PGBD4P5-201ENST00000445958 426 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 RNU7-113P-201ENST00000459273 62 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 RNA5SP148-201ENST00000516527 94 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 AC010297.1-201ENST00000623948 149 ntBASIC2.55□□□□□ -2
AP4E1Q9UPM8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.54□□□□□ -2
AP4E1Q9UPM8 Y_RNA.10-201ENST00000362371 110 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 SNORA22.1-201ENST00000362701 134 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 Y_RNA.370-201ENST00000365589 108 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 RNU6-409P-201ENST00000384114 104 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 SNORA70.7-201ENST00000384159 133 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 MIR605-201ENST00000385078 83 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 SNORA48.1-201ENST00000390879 135 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 RNU6-1275P-201ENST00000391087 107 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 RNU6-592P-201ENST00000411333 103 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 RNU7-61P-201ENST00000515897 61 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 AP003327.1-201ENST00000529684 127 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.54□□□□□ -2
AP4E1Q9UPM8 MIR548AE2-201ENST00000583456 67 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 FAM71BP1-201ENST00000604431 523 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 AC021506.2-201ENST00000612354 169 ntBASIC2.54□□□□□ -2
AP4E1Q9UPM8 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.53□□□□□ -2
AP4E1Q9UPM8 RNU6-170P-201ENST00000362832 104 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 SNORA38-201ENST00000363946 132 ntBASIC2.53□□□□□ -2
AP4E1Q9UPM8 MIR526A1-201ENST00000384897 85 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms