Protein–RNA interactions for Protein: Q9NRJ3

CCL28, C-C motif chemokine 28, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28Q9NRJ3 RNU7-73P-201ENST00000458743 63 ntBASIC0.44□□□□□ -2.34
CCL28Q9NRJ3 AC006006.1-201ENST00000603082 144 ntBASIC0.44□□□□□ -2.34
CCL28Q9NRJ3 uc_338.17-201ENST00000619633 179 ntBASIC0.44□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.16-201ENST00000362421 102 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.37-201ENST00000362606 108 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.64-201ENST00000362845 102 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.84-201ENST00000363011 104 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.216-201ENST00000364205 93 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNU1-93P-201ENST00000364704 169 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 SNORA40.5-201ENST00000391061 128 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNU6-938P-201ENST00000411285 103 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 SNORD83.1-201ENST00000411362 77 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 SERF1AP1-201ENST00000514575 187 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNU6-693P-201ENST00000516134 107 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 SNORA18.4-201ENST00000516440 124 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNA5SP121-201ENST00000516537 101 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNU6-958P-201ENST00000516995 106 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 AC020661.2-201ENST00000560114 134 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 CYP3A137P-201ENST00000562436 69 ntBASIC0.43□□□□□ -2.34
CCL28Q9NRJ3 RNA5SP432-201ENST00000362480 116 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.153-201ENST00000363615 91 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 RNU4-10P-201ENST00000364383 140 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 SNORA63C-201ENST00000364578 129 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 RNU6-934P-201ENST00000365154 107 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 SNORA8.3-201ENST00000384679 139 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 MIR520F-201ENST00000384824 87 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 MIR548A2-201ENST00000384956 97 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 MIR573-201ENST00000384964 99 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 RNU7-62P-201ENST00000458856 62 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.638-201ENST00000459374 113 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 RNU6-977P-201ENST00000516411 103 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 RNU7-53P-201ENST00000516705 60 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 RNU6-365P-201ENST00000517113 106 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 AC100767.1-201ENST00000528178 123 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 AC018659.1-201ENST00000551083 169 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.42□□□□□ -2.34
CCL28Q9NRJ3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-888P-201ENST00000363010 101 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.202-201ENST00000364083 110 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.229-201ENST00000364347 113 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 Y_RNA.275-201ENST00000364726 110 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 SNORA36.2-201ENST00000384004 127 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-211P-201ENST00000384047 107 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 SNORD61-201ENST00000384252 73 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 SNORA27-201ENST00000384323 126 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 MIR520E-201ENST00000384867 87 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 MIR520H-201ENST00000385126 88 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-913P-201ENST00000390913 95 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-733P-201ENST00000410759 104 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-177P-201ENST00000411257 104 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 MTND5P22-201ENST00000458380 195 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RPS29P24-201ENST00000486345 171 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-1338P-201ENST00000516328 91 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 RNU6-1270P-201ENST00000517128 108 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 AC242498.1-201ENST00000604134 111 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 Z97988.1-201ENST00000637697 135 ntBASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.41□□□□□ -2.34
CCL28Q9NRJ3 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.24-201ENST00000362508 103 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1289P-201ENST00000384431 106 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 SNORD38B-201ENST00000384690 67 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 SNORA26-201ENST00000391286 122 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1203P-201ENST00000410703 110 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 AC113618.1-201ENST00000416747 285 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 RNU6-504P-201ENST00000516568 104 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 SNORD36C-201ENST00000516733 66 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 SNORD38B-202ENST00000625943 69 ntBASIC0.4□□□□□ -2.35
CCL28Q9NRJ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 RNY1P8-201ENST00000383970 114 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 MIR626-201ENST00000385032 94 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 MIR140-201ENST00000385282 100 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 AC015818.7-201ENST00000428754 109 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 AC087499.7-201ENST00000441958 109 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 MIR4804-201ENST00000581683 73 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 MIR4676-201ENST00000583078 72 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 MIR8055-201ENST00000610739 97 ntBASIC0.39□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.66-201ENST00000362862 102 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 SNORD114-22-201ENST00000365423 72 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU4-45P-201ENST00000365469 141 ntBASIC0.38□□□□□ -2.35
CCL28Q9NRJ3 RNU6-484P-201ENST00000384016 107 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms