Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 RNU6-426P-201ENST00000516464 97 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 FAM106DP-201ENST00000586416 501 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 RNU6-774P-201ENST00000363238 107 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 RNY1P5-201ENST00000383890 115 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 AC006461.1-201ENST00000412637 326 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 AC244636.1-201ENST00000421152 228 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 RNU1-92P-201ENST00000517017 135 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 RNU6-1116P-201ENST00000517269 99 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 AL442644.1-201ENST00000454390 3105 ntBASIC1.22□□□□□ -2.21
PCNX3Q9H6A9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 RNU6-1189P-201ENST00000383958 107 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 SNORD61-201ENST00000384252 73 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.488-201ENST00000384403 102 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 JTBP1-201ENST00000441314 247 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 RPL23AP6-201ENST00000446637 472 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 AC092991.1-201ENST00000477176 376 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 AC023790.1-201ENST00000482174 347 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 SNORA31.10-201ENST00000516482 106 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 AC090142.3-201ENST00000519012 385 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 MIR4299-201ENST00000577899 72 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 MIR3129-201ENST00000581095 76 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.21□□□□□ -2.22
PCNX3Q9H6A9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 RNU6-1123P-201ENST00000362347 106 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 RNU6-268P-201ENST00000364174 107 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 U8.5-201ENST00000364528 136 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 SNORA1.2-201ENST00000365189 134 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.497-201ENST00000384447 98 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 U8.17-201ENST00000391292 132 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 AC004965.1-201ENST00000413033 213 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 RNU6-704P-201ENST00000364162 103 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 MIR516B2-201ENST00000385190 85 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 SNORA40.5-201ENST00000391061 128 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 SNORA75.5-201ENST00000391291 81 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 AL392103.1-201ENST00000447000 198 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 RNU7-181P-201ENST00000517234 74 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 AL160236.1-201ENST00000556317 195 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 MIR3910-1-201ENST00000580936 111 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
PCNX3Q9H6A9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 MIR424-201ENST00000362227 98 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.338-201ENST00000365320 114 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.542-201ENST00000384641 111 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 HSPE1P24-201ENST00000450782 238 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 SNORA18.7-201ENST00000516910 131 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 AL512598.1-201ENST00000610158 273 ntBASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.19□□□□□ -2.22
PCNX3Q9H6A9 RNU4-11P-201ENST00000365287 132 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 RNU6-1067P-201ENST00000384752 107 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 MIR526A1-201ENST00000384897 85 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 SNORA67.6-201ENST00000391093 99 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 AC008834.1-201ENST00000511612 175 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 MIR3121-201ENST00000579680 77 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 MIR548X2-201ENST00000579776 100 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 MIR3660-201ENST00000584845 100 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.37-201ENST00000362606 108 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 SNORD1A-201ENST00000364968 72 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 RNU6-1336P-201ENST00000383886 109 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 AC090049.2-201ENST00000550377 109 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 AC106754.2-201ENST00000623006 233 ntBASIC1.18□□□□□ -2.22
PCNX3Q9H6A9 Y_RNA.351-201ENST00000365436 96 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 SNORA27-201ENST00000384323 126 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 AL451046.2-201ENST00000403074 277 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 AC087499.4-201ENST00000448505 178 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 CYCTP-201ENST00000504253 315 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 SNORA31.24-201ENST00000517232 57 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 AC015726.2-201ENST00000620112 122 ntBASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
PCNX3Q9H6A9 RNU6-309P-201ENST00000364573 106 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 SNORA1-201ENST00000384107 130 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 RNU6-959P-201ENST00000384671 107 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 AC099513.1-201ENST00000490423 301 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 TRMT112P2-201ENST00000512910 132 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 SNORD111.1-201ENST00000516421 86 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 MIR4764-201ENST00000580680 88 ntBASIC1.16□□□□□ -2.22
PCNX3Q9H6A9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 198.5 ms