Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 SNORD2.1-201ENST00000458762 69 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.650-201ENST00000459002 102 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 RNU7-90P-201ENST00000459216 62 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 SNORD124-201ENST00000459577 104 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 PDCD5P2-201ENST00000507570 312 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.777-201ENST00000516982 102 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 RNU7-181P-201ENST00000517234 74 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 MIR4662B-201ENST00000579498 81 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.771-201ENST00000598668 102 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 AC008737.2-201ENST00000599446 118 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 U2.14-201ENST00000615943 113 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.789-201ENST00000622480 102 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 U6.104-201ENST00000637979 90 ntBASIC0.73□□□□□ -2.29
NXF3Q9H4D5 AC008163.1-202ENST00000636004 2889 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NXF3Q9H4D5 HSBP1P2-201ENST00000299671 229 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 MIR103A2-201ENST00000362154 78 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.176-201ENST00000363815 109 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 RNU6-740P-201ENST00000364734 105 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 SNORA1.2-201ENST00000365189 134 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 RNU6-472P-201ENST00000384299 107 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 MIR100-201ENST00000385259 80 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AL392103.1-201ENST00000447000 198 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.72□□□□□ -2.29
NXF3Q9H4D5 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 RNU2-13P-201ENST00000515909 113 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 RNU6-126P-201ENST00000516685 103 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 RNU11-2P-201ENST00000516898 142 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.72□□□□□ -2.29
NXF3Q9H4D5 MIR4282-201ENST00000583613 67 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AC006006.1-201ENST00000603082 144 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 SEPT14P17-201ENST00000617978 177 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 AC015726.2-201ENST00000620112 122 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 MIR4251-201ENST00000635819 61 ntBASIC0.72□□□□□ -2.29
NXF3Q9H4D5 Y_RNA.461-201ENST00000384263 103 ntBASIC0.71□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.71□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.547-201ENST00000384654 119 ntBASIC0.71□□□□□ -2.3
NXF3Q9H4D5 MIR548O-201ENST00000408583 114 ntBASIC0.71□□□□□ -2.3
NXF3Q9H4D5 AC100767.1-201ENST00000528178 123 ntBASIC0.71□□□□□ -2.3
NXF3Q9H4D5 AC106800.4-201ENST00000614905 153 ntBASIC0.71□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.24-201ENST00000362508 103 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.229-201ENST00000364347 113 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.396-201ENST00000383949 103 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.494-201ENST00000384432 111 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 RNU6-342P-201ENST00000384521 104 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 MIR1302-7-201ENST00000408841 72 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 RNA5SP95-201ENST00000410319 137 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.7□□□□□ -2.3
NXF3Q9H4D5 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 AL358176.2-201ENST00000425769 204 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.666-201ENST00000516187 112 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 RNU7-25P-201ENST00000516544 62 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 AC023827.1-201ENST00000569247 97 ntBASIC0.7□□□□□ -2.3
NXF3Q9H4D5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.7□□□□□ -2.3
NXF3Q9H4D5 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.47-201ENST00000362697 108 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 RNU6-654P-201ENST00000364373 107 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 MIR613-201ENST00000385248 95 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 MT-TT-201ENST00000387460 66 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 RNU2-55P-201ENST00000411146 174 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 SCARNA8-201ENST00000515924 131 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 MIR4643-201ENST00000577473 78 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 AC012433.1-201ENST00000588916 398 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 MIR6513-201ENST00000621188 64 ntBASIC0.69□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.149-201ENST00000363558 117 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.352-201ENST00000365439 102 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 RNY3P5-201ENST00000384127 102 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.459-201ENST00000384251 102 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 SNORA51.10-201ENST00000384418 136 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.590-201ENST00000410140 107 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 RNU6-847P-201ENST00000411115 108 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 MTND5P15-201ENST00000434246 349 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 FABP5P4-201ENST00000437203 171 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 AC087499.4-201ENST00000448505 178 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 AC007751.1-201ENST00000529260 376 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 AC109810.1-201ENST00000534066 224 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 MIR4719-201ENST00000585233 84 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 AL360085.1-201ENST00000604713 532 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 MIR4791-201ENST00000607666 84 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.68□□□□□ -2.3
NXF3Q9H4D5 SNORD115-28-201ENST00000363931 81 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 Y_RNA.304-201ENST00000365011 112 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 SNORD24-201ENST00000383884 75 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 SNORA24-201ENST00000384096 131 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.67□□□□□ -2.3
NXF3Q9H4D5 RNU6-197P-201ENST00000516680 100 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 RNU6-453P-201ENST00000516819 85 ntBASIC0.67□□□□□ -2.3
NXF3Q9H4D5 SNORD115-34-201ENST00000362441 82 ntBASIC0.66□□□□□ -2.3
NXF3Q9H4D5 SNORD115-12-201ENST00000362583 82 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms