Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 SNORD115-42-201ENST00000364273 82 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 RNU4-10P-201ENST00000364383 140 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 Y_RNA.275-201ENST00000364726 110 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-15-201ENST00000364809 81 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-1-201ENST00000364961 82 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-26-201ENST00000365067 82 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-10-201ENST00000365073 81 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-43-201ENST00000365503 82 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-36-201ENST00000365629 82 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 RNU6-639P-201ENST00000384074 107 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 Y_RNA.486-201ENST00000384398 107 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 MT-TN-201ENST00000387400 73 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.65□□□□□ -2.31
LHX4Q969G2 SNORD115-40-201ENST00000606510 82 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 AC108706.1-201ENST00000611053 297 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 AL136317.1-201ENST00000612653 226 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.65□□□□□ -2.31
LHX4Q969G2 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
LHX4Q969G2 SNORD115-28-201ENST00000363931 81 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 Y_RNA.241-201ENST00000364470 117 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 RNU6-211P-201ENST00000384047 107 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 Y_RNA.494-201ENST00000384432 111 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 RNU6-110P-201ENST00000384508 104 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 Y_RNA.587-201ENST00000391210 103 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 MIR1827-201ENST00000408549 66 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 AC113618.1-201ENST00000416747 285 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 AC107297.1-201ENST00000459991 176 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 SCARNA24.2-201ENST00000516968 130 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 AC044792.1-201ENST00000593294 196 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 AC006006.1-201ENST00000603082 144 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 AC104465.1-201ENST00000611365 139 ntBASIC0.64□□□□□ -2.31
LHX4Q969G2 SNORD45.3-201ENST00000363836 72 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 RNU6-580P-201ENST00000365159 107 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 RNU6-1227P-201ENST00000383981 107 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 RNU6-1289P-201ENST00000384431 106 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 MIR518F-201ENST00000384973 87 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 AC004941.2-201ENST00000427009 228 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 AC087499.4-201ENST00000448505 178 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 snoU13.16-201ENST00000459350 104 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.63□□□□□ -2.31
LHX4Q969G2 RNU6-126P-201ENST00000516685 103 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 RNU6-570P-201ENST00000517051 105 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 DEFB108E-201ENST00000524692 240 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 AP000942.4-201ENST00000604811 241 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 MIR6835-201ENST00000621552 64 ntBASIC0.63□□□□□ -2.31
LHX4Q969G2 AC023934.1-201ENST00000574529 2389 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 Y_RNA.229-201ENST00000364347 113 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 Y_RNA.376-201ENST00000365638 108 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 SNORD24-201ENST00000383884 75 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 SNORA8.3-201ENST00000384679 139 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 Y_RNA.572-201ENST00000384757 98 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 MIR548A2-201ENST00000384956 97 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
LHX4Q969G2 RNU6-938P-201ENST00000411285 103 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 RNU6-1153P-201ENST00000516760 105 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.62□□□□□ -2.31
LHX4Q969G2 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 AP000753.3-201ENST00000604083 169 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 AC022709.1-201ENST00000615967 87 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 AP001282.2-201ENST00000616149 309 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 AC134878.1-201ENST00000619901 243 ntBASIC0.62□□□□□ -2.31
LHX4Q969G2 Y_RNA.24-201ENST00000362508 103 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 Y_RNA.117-201ENST00000363294 101 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 MIR626-201ENST00000385032 94 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 AC090844.1-201ENST00000422019 156 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 RNU7-67P-201ENST00000459003 62 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 AC100767.1-201ENST00000528178 123 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 MIR4264-201ENST00000583520 66 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 MIR7111-201ENST00000619751 72 ntBASIC0.61□□□□□ -2.31
LHX4Q969G2 MIR1-1-201ENST00000362147 71 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 RNU6-369P-201ENST00000362515 102 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 Y_RNA.37-201ENST00000362606 108 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 Y_RNA.44-201ENST00000362676 108 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 RNU6-888P-201ENST00000363010 101 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 Y_RNA.354-201ENST00000365448 111 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 SNORD61-201ENST00000384252 73 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 MIR489-201ENST00000384923 84 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 RNU6-205P-201ENST00000390858 107 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 SNORA40.5-201ENST00000391061 128 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 RNU6-1109P-201ENST00000391187 107 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.6□□□□□ -2.31
LHX4Q969G2 TRBVB-201ENST00000477100 408 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 RNU6-693P-201ENST00000516134 107 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 SNORA18.4-201ENST00000516440 124 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 MIR6515-201ENST00000619843 57 ntBASIC0.6□□□□□ -2.31
LHX4Q969G2 Y_RNA.11-201ENST00000362375 109 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 Y_RNA.237-201ENST00000364439 102 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
LHX4Q969G2 MIR508-201ENST00000384857 115 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 SNORD105-201ENST00000386910 85 ntBASIC0.59□□□□□ -2.31
LHX4Q969G2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms