Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL31P63-201ENST00000422565 375 ntBASIC1.59□□□□□ -2.15
SNED1Q8TER0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.59□□□□□ -2.15
SNED1Q8TER0 SNORD11-201ENST00000459124 84 ntBASIC1.59□□□□□ -2.15
SNED1Q8TER0 OR9P1P-201ENST00000496431 281 ntBASIC1.59□□□□□ -2.15
SNED1Q8TER0 RNU6-1041P-201ENST00000516254 102 ntBASIC1.59□□□□□ -2.15
SNED1Q8TER0 RNU7-99P-201ENST00000516271 62 ntBASIC1.59□□□□□ -2.15
SNED1Q8TER0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.59□□□□□ -2.15
SNED1Q8TER0 AC073413.2-201ENST00000604332 360 ntBASIC1.59□□□□□ -2.15
SNED1Q8TER0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SNED1Q8TER0 RNU6-235P-201ENST00000362644 107 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
SNED1Q8TER0 RNU11-5P-201ENST00000391216 129 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 RNU7-107P-201ENST00000459121 61 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 RN7SKP179-201ENST00000516126 217 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 RNU1-142P-201ENST00000516682 145 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 RNU6-919P-201ENST00000516731 104 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 RNU6-365P-201ENST00000517113 106 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.58□□□□□ -2.16
SNED1Q8TER0 AC090049.2-201ENST00000550377 109 ntBASIC1.58□□□□□ -2.16
SNED1Q8TER0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.58□□□□□ -2.16
SNED1Q8TER0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.58□□□□□ -2.16
SNED1Q8TER0 snoU2-30.2-201ENST00000362805 70 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 SNORD114-6-201ENST00000364393 72 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 Y_RNA.267-201ENST00000364679 109 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNU6-1056P-201ENST00000383996 107 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 Y_RNA.525-201ENST00000384570 113 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MIR520E-201ENST00000384867 87 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 SNORA18.4-201ENST00000516440 124 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNU6-1291P-201ENST00000516591 104 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNU6-126P-201ENST00000516685 103 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNU6-1223P-201ENST00000517124 104 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 AC022254.1-201ENST00000567857 235 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MIR3198-2-201ENST00000577868 80 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MIR4662B-201ENST00000579498 81 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 AC131055.1-201ENST00000584626 316 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 AL359075.3-201ENST00000613288 217 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MIR338-201ENST00000636369 67 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNU6-834P-201ENST00000362367 110 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 Y_RNA.120-201ENST00000363304 110 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MIR562-201ENST00000384894 95 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 RNA5SP323-201ENST00000391094 133 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MLLT10P1-201ENST00000418346 262 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 SNRPGP10-201ENST00000432323 225 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.57□□□□□ -2.16
SNED1Q8TER0 AC008834.1-201ENST00000511612 175 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 MIR3121-201ENST00000579680 77 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 AC091178.2-201ENST00000584401 117 ntBASIC1.57□□□□□ -2.16
SNED1Q8TER0 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
SNED1Q8TER0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
SNED1Q8TER0 SNORD114-27-201ENST00000363766 70 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 Y_RNA.563-201ENST00000384707 108 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 RPS29P1-201ENST00000465274 159 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 RNU5E-3P-201ENST00000515913 68 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 RNU6-504P-201ENST00000516568 104 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 AC133485.4-201ENST00000561835 220 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 AC138907.4-201ENST00000570107 226 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 MIR151B-201ENST00000584249 96 ntBASIC1.56□□□□□ -2.16
SNED1Q8TER0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.56□□□□□ -2.16
SNED1Q8TER0 AC018630.2-201ENST00000534866 2403 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 Y_RNA.114-201ENST00000363265 113 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 RNU6-1164P-201ENST00000364428 107 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 RNU6-309P-201ENST00000364573 106 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 SNORA12.1-201ENST00000390873 148 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 Y_RNA.690-201ENST00000516603 95 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 RNU6-341P-201ENST00000516973 96 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 AC097639.2-201ENST00000603159 172 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 MIR6079-201ENST00000635807 62 ntBASIC1.55□□□□□ -2.16
SNED1Q8TER0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.54□□□□□ -2.16
SNED1Q8TER0 MIR126-201ENST00000362291 85 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 RNU6-160P-201ENST00000384591 107 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 MIR222-201ENST00000384992 110 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 AL603914.1-201ENST00000401964 204 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 AL117342.1-201ENST00000404861 406 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 RNU6-1064P-201ENST00000410626 104 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 RNA5SP501-201ENST00000410990 112 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 RNA5SP127-201ENST00000411051 133 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.54□□□□□ -2.16
SNED1Q8TER0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.54□□□□□ -2.16
SNED1Q8TER0 AL158147.1-201ENST00000443970 75 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 AL049830.1-201ENST00000468034 425 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 AC023790.1-201ENST00000482174 347 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 RNU6-1061P-201ENST00000516530 99 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 RNU7-128P-201ENST00000517247 62 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.54□□□□□ -2.16
SNED1Q8TER0 AC022217.4-201ENST00000604389 163 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 MIR6788-201ENST00000618842 66 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 U6.108-201ENST00000637764 58 ntBASIC1.54□□□□□ -2.16
SNED1Q8TER0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 RNU6-508P-201ENST00000363231 103 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 Y_RNA.253-201ENST00000364562 112 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 RNU6-203P-201ENST00000384038 104 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 MIR624-201ENST00000385217 97 ntBASIC1.53□□□□□ -2.16
SNED1Q8TER0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms